Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_H02
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 251 3e-67
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 250 8e-67
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 241 3e-64
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 238 3e-63
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 229 2e-60
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 155 4e-38
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 142 2e-34
08_02_0605 + 19237482-19237644,19237957-19238246 29 4.5
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 28 7.8
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 251 bits (615), Expect = 3e-67
Identities = 120/171 (70%), Positives = 136/171 (79%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
TTT+KASAHL GGAKKV+ISAPSADAPMFVVGVN ++YDP V+SNASCTTNCLAPLAK
Sbjct: 239 TTTEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAK 298
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
V+H+ F I+EGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+P
Sbjct: 299 VVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLP 358
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
+LNGKLTGMAFRVP VSVVDLT R+ K ASY+ +K +K A+EG LKGI
Sbjct: 359 ELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGI 409
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D L +NGKK+ + S+RDP IPWG GAEYVVES+GV
Sbjct: 200 DSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGV 237
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 250 bits (612), Expect = 8e-67
Identities = 121/171 (70%), Positives = 135/171 (78%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
TTT+KASAHL GGA+KV+ISAPSADAPMFVVGVN + Y+PS V+SNASCTTNCLAPLAK
Sbjct: 180 TTTEKASAHLKGGARKVVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAK 239
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
++H+ F I EGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+P
Sbjct: 240 IVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLP 299
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
LNGKLTGMAFRVP VSVVDLT RL K ASYE +K +KEA+EG LKGI
Sbjct: 300 ALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGI 350
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2
Query: 17 LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
L +NGKKI+V S+RDP IPWG GAEYVVES+GV
Sbjct: 144 LEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGV 178
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 621 SFEGHLGYTEDQVVSSDF 674
S +G LGYT++ VVS+DF
Sbjct: 346 SLKGILGYTDEDVVSNDF 363
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 241 bits (591), Expect = 3e-64
Identities = 118/171 (69%), Positives = 130/171 (76%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN + Y P ++SNASCTTNCLAPLAK
Sbjct: 153 TDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAK 212
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
VI+D F I+EGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P
Sbjct: 213 VINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP 272
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
LNGKLTGMAFRVP VSVVDLTVRL KPASY+ IK +KE +EG LKGI
Sbjct: 273 ALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGI 323
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +2
Query: 17 LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
L+ K++ VF R+P IPWG+ GAE+VVESTGV
Sbjct: 117 LLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGV 151
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 238 bits (583), Expect = 3e-63
Identities = 116/171 (67%), Positives = 129/171 (75%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
T +KA+AHL GGAKKV+ISAPS DAPMFV GVN + Y ++SNASCTTNCLAPLAK
Sbjct: 128 TDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAK 187
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
VIHDNF IIEGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P
Sbjct: 188 VIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLP 247
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
LNGKLTGM+FRVP VSVVDLTVR+ K ASY+AIK +K A+EG LKGI
Sbjct: 248 DLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGI 298
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 53 ERDPHAIPWGQAGAEYVVESTGV 121
ER+P IPW +AGAEYVVESTGV
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGV 126
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 229 bits (559), Expect = 2e-60
Identities = 112/163 (68%), Positives = 123/163 (75%)
Frame = +1
Query: 148 HLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHDNFEI 327
H+ GGAKKV+ISAPS DAPMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F I
Sbjct: 132 HMQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGI 191
Query: 328 IEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTG 507
+EGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P LNGKLTG
Sbjct: 192 VEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTG 251
Query: 508 MAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
MAFRVP VSVVDLTVRL KPASY+ IK +KE AEG LKGI
Sbjct: 252 MAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGI 294
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 17 LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
L+ K++AVF R+P IPW AGAEYVVESTGV
Sbjct: 74 LIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGV 108
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 155 bits (375), Expect = 4e-38
Identities = 81/169 (47%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Frame = +1
Query: 133 DKASAHLVGGAKKVIISAPS-ADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 309
D A H+ GAKKV+I+AP D P +VVGVN + Y P +ISNASCTTNCLAP K++
Sbjct: 172 DGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKIL 231
Query: 310 HDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQL 489
F II+G M D L R R A NI+P STGAAKAV V+P L
Sbjct: 232 DQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNL 290
Query: 490 NGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
GKL G+A RVP VSVVDL V++ K E + Q +++A LKGI
Sbjct: 291 KGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGI 339
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D + V+GK I V S+R+P +PWG+ G + V+E TGV
Sbjct: 130 DNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGV 167
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 142 bits (344), Expect = 2e-34
Identities = 80/172 (46%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Frame = +1
Query: 139 ASAHLVGGAKKVIISAPS--ADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVI 309
A H+ GAKKVII+AP+ AD P +V+GVN Y +ISNASCTTNCLAP K++
Sbjct: 184 AGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKIL 243
Query: 310 HDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQL 489
+ F I++G M D L R R A NI+P STGAAKAV V+PQL
Sbjct: 244 DEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPQL 302
Query: 490 NGKLTGMAFRVPVAXVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGIWD 642
GKL G+A RVP VSVVDL + K + + + ++AA GPL GI D
Sbjct: 303 KGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILD 354
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D + V+GK I V S RDP +PW + G + V+E TGV
Sbjct: 140 DQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGV 177
>08_02_0605 + 19237482-19237644,19237957-19238246
Length = 150
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 375 LLGGSSGM--HCSHQTFNNFKVVVDDLCEGCE 286
LLGGSSG H + FN ++ V C+GCE
Sbjct: 12 LLGGSSGKTSHKKKRQFNTVELKVRMDCDGCE 43
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 424 QQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKV 603
QQ A+TG K V P +NG +GM + + +V + ++LG+ ++ + K +
Sbjct: 9 QQQTAAAATGVWKTVK---PFVNGGASGMLATCVIQPIDMVKVKIQLGEGSAAQVTKNML 65
Query: 604 KEAAEGPL-KGI 636
G KG+
Sbjct: 66 ANEGIGSFYKGL 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,786,486
Number of Sequences: 37544
Number of extensions: 405626
Number of successful extensions: 997
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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