Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_H02
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 248 2e-66
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 244 4e-65
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 232 2e-61
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 231 2e-61
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 155 3e-38
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 153 8e-38
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 149 2e-36
At5g44700.1 68418.m05477 leucine-rich repeat transmembrane prote... 29 3.8
At5g23220.1 68418.m02716 isochorismatase hydrolase family protei... 28 5.0
At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative ... 28 5.0
At1g74360.1 68414.m08615 leucine-rich repeat transmembrane prote... 28 6.6
At1g17630.1 68414.m02181 pentatricopeptide (PPR) repeat-containi... 28 6.6
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family pr... 28 6.6
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 248 bits (608), Expect = 2e-66
Identities = 119/171 (69%), Positives = 134/171 (78%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
TT KA++HL GGAKKVIISAPSADAPMFVVGVN Y P+ ++SNASCTTNCLAPLAK
Sbjct: 187 TTLSKAASHLKGGAKKVIISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAK 246
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
V+H+ F I+EGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+P
Sbjct: 247 VVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLP 306
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
+LNGKLTGMAFRVP + VSVVDLT RL K ASYE +K +K A+EGPLKGI
Sbjct: 307 ELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEGPLKGI 357
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVSQPLIK 139
D L +NGKK+ V S+RDP IPW GA+YVVES+GV L K
Sbjct: 148 DSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSK 191
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 244 bits (597), Expect = 4e-65
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
TT +AS+HL GGAKKVIISAPSADAPMFVVGVN + Y P+ ++SNASCTTNCLAPLAK
Sbjct: 185 TTVGQASSHLKGGAKKVIISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAK 244
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
V+H+ F I+EGLM DGPS K WR GRGA QNIIP+STGAAKAVGKV+P
Sbjct: 245 VVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLP 304
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
+LNGKLTGMAFRVP VSVVDLT RL K ASYE +K +K A+EGPL+GI
Sbjct: 305 ELNGKLTGMAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEGPLRGI 355
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D L +NGK++ V S+RDP IPW GAEYVVES+GV
Sbjct: 146 DSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGV 183
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 232 bits (567), Expect = 2e-61
Identities = 114/171 (66%), Positives = 128/171 (74%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLAK
Sbjct: 107 TDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAK 166
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
VI+D F I+EGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P
Sbjct: 167 VINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP 226
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
LNGKLTGM+FRVP VSVVDLTVRL K A+Y+ IK+ +KE +EG LKGI
Sbjct: 227 ALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGI 277
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 17 LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
L+ K + VF R+P IPW +AGA+YVVESTGV
Sbjct: 71 LLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGV 105
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 627 EGHLGYTEDQVVSSDF 674
+G LGYTED VVS+DF
Sbjct: 275 KGILGYTEDDVVSTDF 290
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 231 bits (566), Expect = 2e-61
Identities = 113/171 (66%), Positives = 128/171 (74%)
Frame = +1
Query: 124 TTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAK 303
T DKA+AHL GGAKKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLAK
Sbjct: 107 TDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAK 166
Query: 304 VIHDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 483
VI+D F I+EGLM DGPS K WR GR A NIIP+STGAAKAVGKV+P
Sbjct: 167 VINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP 226
Query: 484 QLNGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGI 636
LNGKLTGM+FRVP VSVVDLTVRL K A+Y+ IK+ +KE +EG +KGI
Sbjct: 227 SLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKMKGI 277
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D L+ K + VF R+P IPWG+AGA++VVESTGV
Sbjct: 68 DKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGV 105
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 627 EGHLGYTEDQVVSSDF 674
+G LGYTED VVS+DF
Sbjct: 275 KGILGYTEDDVVSTDF 290
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 155 bits (376), Expect = 3e-38
Identities = 85/171 (49%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +1
Query: 133 DKASAHLVGGAKKVIISAPS-ADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVI 309
D A HL GAKKV+I+AP D P +VVGVN E Y +ISNASCTTNCLAP KV+
Sbjct: 169 DGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVL 228
Query: 310 HDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQL 489
F II+G M D L R R A NI+P STGAAKAV V+P L
Sbjct: 229 DQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNL 287
Query: 490 NGKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGIWD 642
GKL G+A RVP VSVVDL V++ K E + ++AAE LKGI D
Sbjct: 288 KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILD 338
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 8 DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
D L V+GK I + S+R+P +PWG+ G + V+E TGV
Sbjct: 127 DSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGV 164
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 153 bits (372), Expect = 8e-38
Identities = 83/169 (49%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Frame = +1
Query: 139 ASAHLVGGAKKVIISAPS-ADAPMFVVGVNLEAYDPSYKVISNASCTTNCLAPLAKVIHD 315
A H+ GAKKVII+AP D P +VVGVN +AY +ISNASCTTNCLAP KV+
Sbjct: 168 AGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQ 227
Query: 316 NFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNG 495
F II+G M D L R R A NI+P STGAAKAV V+P L G
Sbjct: 228 KFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVLPNLKG 286
Query: 496 KLTGMAFRVPVAXVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGIWD 642
KL G+A RVP VSVVDL V++ K E + +++AE LKGI D
Sbjct: 287 KLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILD 335
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 23 VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
V+GK I V S R+P +PW + G + V+E TGV
Sbjct: 129 VDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGV 161
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 149 bits (360), Expect = 2e-36
Identities = 82/172 (47%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Frame = +1
Query: 139 ASAHLVGGAKKVIISAPS--ADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVI 309
A H+ GA KVII+AP+ AD P +V+GVN + Y +ISNASCTTNCLAP AKV+
Sbjct: 188 AGKHIQAGASKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVL 247
Query: 310 HDNFEIIEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQL 489
+ F I++G M D L R R A NI+P STGAAKAV V+PQL
Sbjct: 248 DEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVSLVLPQL 306
Query: 490 NGKLTGMAFRVPVAXVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGIWD 642
GKL G+A RVP VSVVDL + + K + E + + ++AA GP+KGI D
Sbjct: 307 KGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILD 358
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 5 VDGHLV-VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGV 121
VD + V+GK I V S RDP +PW + G + V+E TGV
Sbjct: 142 VDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGV 181
>At5g44700.1 68418.m05477 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1252
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -2
Query: 243 RIVGFQVDTNYKHGSISTWCGDDYFLGSTHQVSRSFISGCDTPVDSTT 100
++ ++ NY G I TW G LG S F+ T + S T
Sbjct: 649 KLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLT 696
>At5g23220.1 68418.m02716 isochorismatase hydrolase family protein
low similarity to SP|P45743Isochorismatase (EC 3.3.2.1)
(2,3 dihydro-2,3 dihydroxybenzoate synthase)
(Superoxide-inducible protein) (SOI1) {Bacillus
subtilis}; contains Pfam profile PF00857:
isochorismatase family protein
Length = 198
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -2
Query: 207 HGSISTWCGDDYFLGSTH-----QVSRSFISGCDTPVDSTTYSA 91
HG + WC D L T Q + ++G D V+ TYSA
Sbjct: 70 HGMLGEWCNGDVILDGTTDSEIIQEIQGQVTGPDEMVEKNTYSA 113
>At1g17050.1 68414.m02073 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative similar to GI:11322965;
Except for first 55 amino acids, 52% identical to Prenyl
transferase (Cyanophora paradoxa) (gi 99282). Location
of est 120E9T7 (gb|T43950)
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +1
Query: 430 NIIPAST-GAA---KAVGKVIPQLN--GKLTGMAFRVPVAXVSVVDLTVRLGKPASYEAI 591
+++ AST GAA K KV Q+ GK G++F+V + T +LGKPA+ +
Sbjct: 271 SLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLA 330
Query: 592 KQKV 603
K +
Sbjct: 331 KGNI 334
>At1g74360.1 68414.m08615 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive
1 GB:AAC49810 (putative receptor protein kinase);
contains Pfam profiles: PF00560 Leucine Rich Repeat (17
repeats), PF00069 Eukaryotic protein kinase domain
Length = 1106
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 330 NNFKVVVDDLCEGCEAVSCAGSI*NNF-------VGRIVGFQVDTNYKHGSIS 193
NNF +DD+ GC + N F GR+V F V N+ G+IS
Sbjct: 192 NNFTGRIDDIFNGCRNLKYVDFSSNRFSGEVWTGFGRLVEFSVADNHLSGNIS 244
>At1g17630.1 68414.m02181 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 731
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3
Query: 668 RGDDLVFSVSQMPFKGPSAASLTFCLIAS*LAGLP 564
RGDD + QM F A S+T C I S A LP
Sbjct: 414 RGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
>At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 590
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 447 GSRNNVLLSPTAIAPQFSRRSIN 379
G+ NN LLSPT + P+ R IN
Sbjct: 329 GTNNNTLLSPTWVQPENYTRPIN 351
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,536,969
Number of Sequences: 28952
Number of extensions: 303662
Number of successful extensions: 681
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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