Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G20
         (452 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   3.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.3  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 166 LISAIASVICFSTTSNKVTWYPTEANNIAHDLPI 65
           L+     + C   TS  V      ANN+AH + +
Sbjct: 6   LLVVCLGIACQDVTSAAVNHQRKSANNLAHSMKV 39


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 352 TLSKFWNTFFLSSKFSGTHSCTKI 281
           TL KF+  +  S   +G +SC K+
Sbjct: 210 TLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 352 TLSKFWNTFFLSSKFSGTHSCTKI 281
           TL KF+  +  S   +G +SC K+
Sbjct: 210 TLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 258 NHRYLSHIGTVHPHLDFP 205
           N+ YL++ GTVH  ++FP
Sbjct: 360 NYLYLTYNGTVH-DVEFP 376


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +3

Query: 210 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKK 326
           NL  DE F  V   CD        + +  C P   EL K
Sbjct: 24  NLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLK 62


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 62  STPNNSNFFRFKLGSHDDTQ 3
           +T + S+FF   +G H D Q
Sbjct: 352 TTASGSSFFLAVMGCHPDIQ 371


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = +2

Query: 53  WEWTDREIMGYVVRFSRIPSNFVRCC*EANYR 148
           W W++++++  + +  R+P+     C EA Y+
Sbjct: 840 WNWSNQDVIKSIEKGYRLPAPM--DCPEAIYQ 869


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 235 WNCSSAFRFP 206
           W CSSA  FP
Sbjct: 171 WICSSAISFP 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,762
Number of Sequences: 438
Number of extensions: 2879
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)