Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G19
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.16 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   3.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   4.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
 Frame = +3

Query: 15  PQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCHSDQN 194
           P+ + +D G QF S  ++   +    +   ++  HP +N   ER  R+L      +  +N
Sbjct: 257 PKCVLSDHGTQFISNTWQNSLRAADIQPTLSSIRHPESNP-SERVMRELGRIFRAYCREN 315

Query: 195 ---WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSD 308
              W   +  I   +        G S  E++YG T   P D
Sbjct: 316 HASWVNHLSNIEDCLNYVPHISTGFSPYEILYGRTPPNPLD 356


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 75  SKLTGSRHISTTAYHPAANGLVERFH 152
           +++  S+ I+     PAA+ L+ RFH
Sbjct: 361 ARMINSKMIADCESPPAADELLRRFH 386


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/29 (24%), Positives = 19/29 (65%)
 Frame = +3

Query: 357 LSRLRRYMCNLKPTTVIRHGKSNIFVHKD 443
           +++ +  + + +  T+++  KSNIF+ K+
Sbjct: 79  ITKAKNLLYSKQIVTILKKTKSNIFILKE 107


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 426 IFVHKDLQKSSQVFLRN 476
           IF  KD++ S+ +FL N
Sbjct: 93  IFKTKDMRNSTNIFLVN 109


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 426 IFVHKDLQKSSQVFLRN 476
           IF  KD++ S+ +FL N
Sbjct: 93  IFKTKDMRNSTNIFLVN 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,429
Number of Sequences: 336
Number of extensions: 2208
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)