Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G19
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein. 49 8e-06
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 49 1e-05
AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens ... 40 0.005
AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens ... 34 0.23
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 33 0.54
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 33 0.54
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 33 0.54
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 33 0.54
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 33 0.54
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 33 0.54
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 33 0.54
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 33 0.54
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 33 0.54
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 33 0.71
BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452... 31 2.2
BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452... 31 2.2
BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452... 31 2.2
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 31 2.2
AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452... 31 2.2
AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452... 31 2.2
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens ... 31 2.2
AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein. 31 2.2
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 29 8.8
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 29 8.8
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 29 8.8
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 29 8.8
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 29 8.8
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 29 8.8
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 29 8.8
>AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein.
Length = 505
Score = 49.2 bits (112), Expect = 8e-06
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 RFGCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI-MC 179
RFG P + +D G F + + ++LS+L + YHP ++G V+ ++ LK + C
Sbjct: 331 RFGLPLTLGSDNGPAFMAEVVQQLSQLLKIKWKLHIVYHPQSSGKVQWMNQTLKHLLKFC 390
Query: 180 HSDQ-NWYEVIPLILLGIRNAWKEDIGSSSAELVYG 284
W +V+P+ L +R + G S E+V+G
Sbjct: 391 QEPHLRWDQVLPMAFLQVRCTLTKLTGLSPCEIVFG 426
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +3
Query: 3 RFGCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFH---RQLKAAI 173
RFG P +I +D G F + L ++ +K+ G+ AY P ++G VE+ + + K +
Sbjct: 950 RFGLPLRIGSDNGPAFVADLVQKRAKVLGNTWKLHAAYRPQSSGKVEQMNWTIKNSKGKV 1009
Query: 174 MCHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVY 281
+ W + +P++L IR + G S E++Y
Sbjct: 1010 CQETGLKWIQALPMVLFKIRCTPSKRTGYSPYEILY 1045
>AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ16127 fis, clone BRACE2037299. ).
Length = 194
Score = 39.9 bits (89), Expect = 0.005
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +3
Query: 66 KELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCHSDQ---NWYEVIPLILLGIRN 236
K+ +L+ S YHP++ G VER + LK + S Q +W ++P LL IR
Sbjct: 11 KQSPRLSASSGNFIPPYHPSSLGKVERTNGLLKTHLTKLSLQLKKDWTALLPFALLRIRA 70
Query: 237 AWKEDIGSSSAELVYGETLKLPSDFFLASSVAEV 338
+E G S EL YG T L + ++ A++
Sbjct: 71 YPQEATGYSPFELSYGCTFLLGPNLLTDNTYADM 104
>AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ33142 fis, clone UTERU1000192. ).
Length = 120
Score = 34.3 bits (75), Expect = 0.23
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 3 RFGCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI 173
RFG P +I++D G F + L ++++K+ G AY P ++ E+ ++ +K ++
Sbjct: 45 RFGLPLRISSDNGLTFVADLVQKIAKVLGIIWKLHAAYRPQSSRKAEQMNQTIKNSL 101
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 604 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 659
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 565 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 620
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1680
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1627 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1682
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1680
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 32.7 bits (71), Expect = 0.71
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 176
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 592 GVPKKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 647
>BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSKTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPA-ANGLVERFHRQLKAAIMCHS 185
G P + +D G +F + + EL++L I + YHP + G +E R +K I
Sbjct: 264 GTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWM 323
Query: 186 DQN----WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLK 296
N W + + + + A+ + S E ++G K
Sbjct: 324 QSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAK 364
>AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452
protein.
Length = 794
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPA-ANGLVERFHRQLKAAIMCHS 185
G P + +D G +F + + EL++L I + YHP + G +E R +K I
Sbjct: 317 GTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWM 376
Query: 186 DQN----WYEVIPLILLGIRNAWKEDIGSSSAELVYGETLK 296
N W + + + + A+ + S E ++G K
Sbjct: 377 QSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAK 417
>AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ31807 fis, clone NT2RI2009215, moderately
similar to ZINC FINGER PROTEIN 165. ).
Length = 782
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 488
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 489 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 529
>AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein.
Length = 1147
Score = 31.1 bits (67), Expect = 2.2
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 9 GCPQKITTDRGRQFESYLFKELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIM 176
G P + +D GR+F S + ELS + I S T ++ E +++ + +
Sbjct: 251 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQ 310
Query: 177 CHSDQNWYEVIPLILLGIRNAWKEDIGSSSAELVYGETLKL 299
++ +W E + I + + + + E + KL
Sbjct: 311 TNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKL 351
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II
protein.
Length = 1031
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 737 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 779
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 1327 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 1369
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 56 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 98
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 191 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 233
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 423 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 465
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 1304 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 1346
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 RNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYS-DF 356
RN W +D S ++L E + +P D L + AE Y+ DF
Sbjct: 715 RNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDF 757
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,506,904
Number of Sequences: 237096
Number of extensions: 1262244
Number of successful extensions: 2169
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2167
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -