Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G18
         (453 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    25   0.29 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.51 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.1  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   4.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   6.3  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   8.3  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +3

Query: 204 QKQFVTTVDQCCPGYTVINYNP-FTCDP 284
           ++ FV  +  CCPG     Y P F C P
Sbjct: 398 RRAFVRILCACCPGRVRRRYQPAFRCKP 425


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 228 DQCCPGYTV 254
           DQCCPG+T+
Sbjct: 808 DQCCPGFTM 816


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 393 KWANNCVDSTDYPYNWRYID 334
           K ANN   S    Y W++ID
Sbjct: 28  KSANNLAHSMKVIYEWKHID 47


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 363 DYPYNWRYIDRR 328
           +YPY W+ I RR
Sbjct: 86  NYPYEWQLILRR 97


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 387 ANNCVDSTDYPYNWRYID 334
           + N  +S    Y W+YID
Sbjct: 22  SRNLTNSLKVIYEWKYID 39


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 99  LVQVPYQQSYWRPFCF 146
           ++ V +  + WRP CF
Sbjct: 78  ILDVDWLHNIWRPDCF 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,285
Number of Sequences: 438
Number of extensions: 3079
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)