Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G18
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53420.1 68414.m06054 serine/threonine protein kinase-related... 30 0.64
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 30 0.84
At1g16110.1 68414.m01931 wall-associated kinase, putative contai... 30 0.84
At4g13620.1 68417.m02120 AP2 domain-containing transcription fac... 29 1.5
At1g21210.1 68414.m02651 wall-associated kinase 4 29 1.9
At1g35940.1 68414.m04463 AT hook motif-containing protein-relate... 28 2.6
At3g48330.2 68416.m05275 protein-L-isoaspartate O-methyltransfer... 28 3.4
At3g48330.1 68416.m05274 protein-L-isoaspartate O-methyltransfer... 28 3.4
At4g22600.1 68417.m03260 hypothetical protein 27 4.5
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 27 4.5
At3g59180.1 68416.m06598 hypothetical protein contains a novel d... 27 5.9
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 27 7.8
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 27 7.8
At5g54050.1 68418.m06722 DC1 domain-containing protein 27 7.8
At4g13600.1 68417.m02117 glycosyl hydrolase family protein 17 si... 27 7.8
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 7.8
>At1g53420.1 68414.m06054 serine/threonine protein kinase-related
contains 1 predicted transmembrane domain; low
similarity to receptor-like serine/threonine kinase
[Arabidopsis thaliana] GI:2465923
Length = 953
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 GYTV-INYNPFTCDPVCDPPCVNGVCKQPNVCQCNANY 353
GY + ++YN F+ DP N VCK NV C NY
Sbjct: 326 GYKIDLSYNNFSVDPT------NAVCKYNNVLSCMRNY 357
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 29.9 bits (64), Expect = 0.84
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +3
Query: 300 CVNGVCKQPNVCQCNANYTDNPLNPHSCLPI 392
C N + +C+CN Y NP C I
Sbjct: 264 CYNSTTRNGYICKCNEGYDGNPYRSEGCKDI 294
>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
similarity to wall-associated kinase 2 GI:4826399 from
[Arabidopsis thaliana]
Length = 642
Score = 29.9 bits (64), Expect = 0.84
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 330 VCQCNANYTDNPLNPHSCLPI 392
+C CN YT NP H C+ I
Sbjct: 303 ICYCNYGYTGNPYLRHGCIDI 323
>At4g13620.1 68417.m02120 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.4 [Arabidopsis thaliana] GI:2281633;
contains Pfam profile PF00847: AP2 domain
Length = 388
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 93 PELVQVPYQQSYWRPFCFLGPICIYQQTEYRNEWVNKQK 209
P+L+++ +S P+ P YQ + RNEWV K
Sbjct: 154 PKLLELSQSESNMSPYHKYIPNSFYQSDQNRNEWVEINK 192
>At1g21210.1 68414.m02651 wall-associated kinase 4
Length = 738
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Frame = +3
Query: 273 TCDPVCDPPC-VNGVCKQPN-----VCQCNANYTDNPLNPHSCLPICTQCT 407
TC V + C VNG+C C+C + NP + C I +CT
Sbjct: 235 TCGQVGEKKCGVNGICSNSASGIGYTCKCKGGFQGNPYLQNGCQDI-NECT 284
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 1678
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 24 LFTFSSDVESQVCPTQSVEYRNVPE 98
L TFSS ++ + PT+S + NVPE
Sbjct: 271 LDTFSSQIDRFMIPTESTQTANVPE 295
>At3g48330.2 68416.m05275 protein-L-isoaspartate O-methyltransferase
/ PIMT (PCM) identical to SP|Q42539
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
(Protein- beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
protein carboxyl methyltransferase) {Arabidopsis
thaliana}
Length = 230
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 91 SPNLYKFRISSHIGDHFASWAQFAFINKLNIG 186
SP L + ++ H+GD WA+FA + +++G
Sbjct: 134 SPFLKERSLAVHVGDGRQGWAEFAPYDAIHVG 165
>At3g48330.1 68416.m05274 protein-L-isoaspartate O-methyltransferase
/ PIMT (PCM) identical to SP|Q42539
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
(Protein- beta-aspartate methyltransferase) (PIMT)
(Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
protein carboxyl methyltransferase) {Arabidopsis
thaliana}
Length = 230
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 91 SPNLYKFRISSHIGDHFASWAQFAFINKLNIG 186
SP L + ++ H+GD WA+FA + +++G
Sbjct: 134 SPFLKERSLAVHVGDGRQGWAEFAPYDAIHVG 165
>At4g22600.1 68417.m03260 hypothetical protein
Length = 273
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 72 SVEYRNVPELVQVPYQQSYWRPFCFLGPICIYQQTEYRNEWVNKQKQ 212
+ ++ +P L+ ++ S PF FLG I Y T +++++ Q
Sbjct: 68 AADHNTIPYLLFPSWRNSLETPFLFLGDIHPYLLTNLLRSFIDRENQ 114
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 TVINYNPFTCDPVCDPPCVNGVCKQPNVC-QCNANYTDNP 365
+++ P CD + + V+ V +PNVC + +AN D P
Sbjct: 126 SMVEVKPVLCDVMSEEVGVSSVEVEPNVCVEMSANGGDEP 165
>At3g59180.1 68416.m06598 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 475
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 174 TEYRNEWVNKQ-KQFVTTVDQCCPGYTVINYNPFTCDPVCDPPCVNG 311
+++R W++K K FV + G +N C CD CV+G
Sbjct: 27 SKHRRRWIHKSFKLFVNRL-MALQGNAPLNRFSLKCKVRCDSACVDG 72
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 129 NMTADTELVQVRGRSDIQHFAWGKLDFLR 43
N ADT Q R DIQ W L R
Sbjct: 50 NKAADTSAAQARNGKDIQGIPWDSLTLTR 78
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 129 NMTADTELVQVRGRSDIQHFAWGKLDFLR 43
N ADT Q R DIQ W L R
Sbjct: 44 NKAADTSAAQARNGKDIQGIPWDSLTLTR 72
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 192 WVNKQKQFVTTVDQCCPGYTV---INYNPFTCDPVCDPPCVNGVCKQPNVC 335
W N+ + + T + P + INY+ CD + CV+ + QP +C
Sbjct: 50 WQNEVEPWFRTSEYHGPALRISNNINYHCKECDIMMHKDCVDRLFNQPFIC 100
>At4g13600.1 68417.m02117 glycosyl hydrolase family protein 17
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 183
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 288 CDPPCVNGVCKQPNVCQCNANYTDN 362
C P NG+C PN Q +A+Y N
Sbjct: 49 CAPIQPNGLCFLPNTVQAHASYAFN 73
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 132 SNMTADTELVQVRGRSDIQHFAWGKLDFLRLT 37
+N ADT Q R DIQ W +L R T
Sbjct: 47 NNKIADTSADQARKGKDIQGIPWDRLSITRET 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,373,822
Number of Sequences: 28952
Number of extensions: 219367
Number of successful extensions: 536
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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