Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G17
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    73   9e-14
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    72   2e-13
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    60   1e-09
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    37   0.010
AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical ...    32   0.29 
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    31   0.50 
AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-relat...    30   1.2  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-relat...    29   1.5  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    29   1.5  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    29   1.5  
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   8.1  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 73.3 bits (172), Expect = 9e-14
 Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
 Frame = +1

Query: 22  HDIALIRLMVTA-PYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTV 198
           HDIA++ +      + ++ +PICLPS D+   P    +  V+GWG         GL    
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR--QCVVSGWG-------SMGLRYAE 166

Query: 199 K-QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGG-KPGEDACRGDSGGPLMYE-V 369
           + Q   +P ++R  C  + +         +++   CAG  + G D+C+GDSGGP      
Sbjct: 167 RLQAALIPIINRFDCVNSSQIYSS-----MSRSAFCAGYLEGGIDSCQGDSGGPFACRRE 221

Query: 370 GNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 489
              FV+ G +S+G   C  +  PG+YT V  Y+ WI + I
Sbjct: 222 DGAFVLAGVISWGDG-CAQKKQPGIYTMVAPYLSWISAII 260


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 72.1 bits (169), Expect = 2e-13
 Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
 Frame = +1

Query: 22  HDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTVK 201
           +D A++R+      +   RPICLPSL   +         V GWG     I G+ LS+   
Sbjct: 144 YDFAIMRIHPPVNTSTTARPICLPSLPAVENRLC----VVTGWG---STIEGSSLSAPTL 196

Query: 202 QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGE-DACRGDSGGPLMYEVGNT 378
           + + +P +    C +    +      +     LCAG   G+ D+C+GDSGGPLM      
Sbjct: 197 REIHVPLLSTLFCSSLPNYI----GRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGH 252

Query: 379 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 477
           + + G VS+G   C    +PGVY NV+    WI
Sbjct: 253 WELTGVVSWGIG-CARPGMPGVYGNVHSASTWI 284


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
 Frame = +1

Query: 4   NDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGM-YKQFISGT 180
           N+    +DIAL+R+         ++P+CL   D ++         V G+G+   +  SG 
Sbjct: 117 NNQTADNDIALLRISSDLSKLG-IKPVCLVH-DDSKLLKQYKNGVVIGYGLTLGEDSSGE 174

Query: 181 G--LSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGEDACRGDSGGP 354
              ++S   Q   +P +  D C    R L    ++ IT  Q+CAG      A  GDSGGP
Sbjct: 175 PKLINSQTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQICAGAYLHGTA-PGDSGGP 232

Query: 355 LMYEVGN-TFVMVGSVSYGPK----YCGTRNIPGVYTNVYEYIPWIRSTI 489
           L+    N  +V +G  SYG             PGVYT + +Y+PWI+  I
Sbjct: 233 LLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVI 282


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 4/153 (2%)
 Frame = +1

Query: 22  HDIALIRLMVTAPYTDFVRPICL--PSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSST 195
           HD A++ +     +++ VRPICL  P++ YT+       + V GWG  + F     L   
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTK------SLAVPGWG--RIFNESGPLIHE 194

Query: 196 VKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGEDACRGDSGGPLMYEVGN 375
           +        +DRD  +     L       I    +          C GDSGG L Y   N
Sbjct: 195 IPMR-----IDRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDN 249

Query: 376 --TFVMVGSVSYGPKYCGTRNIPGVYTNVYEYI 468
                ++   S+G + C + N+   +T V  Y+
Sbjct: 250 YGRAFLIAITSFGTRGCPS-NMLARFTRVDMYL 281


>AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical
           protein F25E5.4 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 313 KPGEDACRGDSGGPLMYEVGNTFVMVGSVSYGPKYC 420
           K  +  C GD GG  +  + N F M+G  + G K C
Sbjct: 227 KQNQGLCSGDFGGSAVSRIDNRFTMLGFFAQGNKNC 262


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 395  DPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 297
            DPT  K  P      PP SP+HAS P  PP  S
Sbjct: 1617 DPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMS 1649


>AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical
           protein Y47H9C.6 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 136 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 41
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-related
           protein 3 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 136 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 41
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -2

Query: 422 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 264
           PQYF P        +  P  Y +  P+ PL       P  PP +S ++VI  A PP
Sbjct: 85  PQYFQP------QQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134


>AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-related
           protein 2B protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 136 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 41
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 185 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 216


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 136 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 41
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 136 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 41
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -2

Query: 455 TFVYTPGMFLVPQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGLPP 306
           TF+  PG+F +  Y G     P    V P  ++  PPE   H S     P
Sbjct: 378 TFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDP 427


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 328 ACRGDSGGPLMYEVGNTFVMVGSVSY 405
           AC GDSG P+   V    ++VG+V++
Sbjct: 209 ACMGDSGSPVYCFVNGKRILVGTVAH 234


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 301 CAGGKPGEDACRGDSGGP 354
           C  G PGED  RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174


>Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical
           protein F26E4.3 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +2

Query: 161 SSSYLALVCRVQLNNTLNSHMLIETDVKQRKGHCVG 268
           SS  LA++   ++N+TL+S  L+  +  ++KG C G
Sbjct: 258 SSDRLAIISEGRINSTLSSQQLLSCNQHRQKG-CEG 292


>Z68105-4|CAA92120.2|  304|Caenorhabditis elegans Hypothetical
           protein F13E6.5 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 522 LLLPVLIILGYYCTSYPWYVLVNVRIYAGDVPCAAI 415
           + L ++I+LG  C+ + W+    +  Y   +PC  I
Sbjct: 38  MALDIVIVLGISCSLFLWFSGSGINPYERAMPCGDI 73


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 292 EQLCAGGKPGEDACRGDSGGPLMYEVGNTF--VMVGSVSYG 408
           +  C   +  ++ C GDSGG L +   ++    ++  VSYG
Sbjct: 257 DSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYG 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,158,052
Number of Sequences: 27780
Number of extensions: 347218
Number of successful extensions: 1249
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)