Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G15
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   5.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 194 DHFFYCVGENSVGSRMR 144
           DH   CVG  ++GS  R
Sbjct: 651 DHIRQCVGGGTIGSNQR 667


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 424 KRINDENNFKYRKRHLYSIKYNPI 353
           K  N E+N+ +     +S+K  PI
Sbjct: 31  KNQNTEHNYTHNNEMYHSVKEEPI 54


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 107 THSSQPGLRQVLSRVSRRAWRFL 39
           TH S  G  +  S V R+AW+ L
Sbjct: 64  THPSIGGGPRFSSGVGRKAWKHL 86


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 107 THSSQPGLRQVLSRVSRRAWRFL 39
           TH S  G  +  S V R+AW+ L
Sbjct: 64  THPSIGGGPRFSSGVGRKAWKHL 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,821
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)