Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G15
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 86 8e-17
BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 86 8e-17
AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein. 86 8e-17
CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein. 79 1e-14
BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified ... 79 1e-14
BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified ... 79 1e-14
BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein. 79 1e-14
BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein. 79 1e-14
AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein. 79 1e-14
AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein. 79 1e-14
BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 33 0.98
AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C. ... 33 0.98
AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens ... 31 3.0
>BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 86.2 bits (204), Expect = 8e-17
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G LY VHH+W YK+LQ+R ETR + WR GWDE V YTVPL+R M RI+ P + SP Q
Sbjct: 225 IGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ 284
>BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 86.2 bits (204), Expect = 8e-17
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G LY VHH+W YK+LQ+R ETR + WR GWDE V YTVPL+R M RI+ P + SP Q
Sbjct: 225 IGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ 284
>AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein.
Length = 284
Score = 86.2 bits (204), Expect = 8e-17
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G LY VHH+W YK+LQ+R ETR + WR GWDE V YTVPL+R M RI+ P + SP Q
Sbjct: 225 IGELYVVHHLWAYKDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ 284
>CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein.
Length = 285
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 226 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 285
>AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 79.0 bits (186), Expect = 1e-14
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 1 VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ 180
+G+LY VHH+W Y++LQ R + R + W GW+E V YTVPLI+EM RI+ P + SP Q
Sbjct: 227 IGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRIMIPLKTSPLQ 286
>BC005935-1|AAH05935.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 32.7 bits (71), Expect = 0.98
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 4 GRLYNVHHIWCYKNLQARRETRESTWRNPGWDE 102
GR+ V HIW Y N R E R++ ++ W E
Sbjct: 79 GRMNTVFHIWKYDNFAHRTEVRKALAKDKEWQE 111
>AL359846-7|CAH73580.1| 247|Homo sapiens nipsnap homolog 3A (C.
elegans) protein.
Length = 247
Score = 32.7 bits (71), Expect = 0.98
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 4 GRLYNVHHIWCYKNLQARRETRESTWRNPGWDE 102
GR+ V HIW Y N R E R++ ++ W E
Sbjct: 79 GRMNTVFHIWKYDNFAHRTEVRKALAKDKEWQE 111
>AK024015-1|BAB14777.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ13953 fis, clone Y79AA1001078. ).
Length = 247
Score = 31.1 bits (67), Expect = 3.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 4 GRLYNVHHIWCYKNLQARRETRESTWRNPGWDE 102
GR+ V HIW Y N R E +++ ++ W E
Sbjct: 79 GRMNTVFHIWKYDNFAHRTEVQKALAKDKEWQE 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,636,889
Number of Sequences: 237096
Number of extensions: 1482041
Number of successful extensions: 2535
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2535
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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