Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G15
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical pr...    78   4e-15
L14710-1|AAL06038.1|  289|Caenorhabditis elegans Hypothetical pr...    78   4e-15
AJ001262-1|CAA04636.1|  231|Caenorhabditis elegans putative NIPS...    78   4e-15
Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical p...    28   4.2  
AC084155-9|AAO25978.1|  423|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC084155-8|AAG23358.2|  499|Caenorhabditis elegans Hypothetical ...    28   5.6  

>L14710-4|AAK84537.3|  526|Caenorhabditis elegans Hypothetical
           protein K02D10.1a protein.
          Length = 526

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = +1

Query: 1   VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFS 171
           VG+LY V+HIW Y ++  R +TR +TW  PGWD  VA TVPLI++M  +IL PT++S
Sbjct: 467 VGQLYVVYHIWAYPSMSGRNDTRHATWAKPGWDATVANTVPLIKKMQSKILTPTKYS 523


>L14710-1|AAL06038.1|  289|Caenorhabditis elegans Hypothetical
           protein K02D10.1b protein.
          Length = 289

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = +1

Query: 1   VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFS 171
           VG+LY V+HIW Y ++  R +TR +TW  PGWD  VA TVPLI++M  +IL PT++S
Sbjct: 230 VGQLYVVYHIWAYPSMSGRNDTRHATWAKPGWDATVANTVPLIKKMQSKILTPTKYS 286


>AJ001262-1|CAA04636.1|  231|Caenorhabditis elegans putative NIPSNAP
           protein protein.
          Length = 231

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = +1

Query: 1   VGRLYNVHHIWCYKNLQARRETRESTWRNPGWDECVAYTVPLIREMHCRILEPTEFS 171
           VG+LY V+HIW Y ++  R +TR +TW  PGWD  VA TVPLI++M  +IL PT++S
Sbjct: 172 VGQLYVVYHIWAYPSMSGRNDTRHATWAKPGWDATVANTVPLIKKMQSKILTPTKYS 228


>Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 239 FYFIFILHSRYYSVFDHFFYC-VGENSVGSRMRQC 138
           F+++ +L +  Y  F H +YC +G N  G    +C
Sbjct: 451 FFYVSVLFTTMYLFFYHDWYCAIGHNPCGQANLKC 485


>Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 239 FYFIFILHSRYYSVFDHFFYC-VGENSVGSRMRQC 138
           F+++ +L +  Y  F H +YC +G N  G    +C
Sbjct: 451 FFYVSVLFTTMYLFFYHDWYCAIGHNPCGQANLKC 485


>AC084155-9|AAO25978.1|  423|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.9b protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 412 DENNFKYRKRHLYSIKYNPI 353
           D NN + RK HL S+K NP+
Sbjct: 293 DWNNSEIRKNHLKSLKINPV 312


>AC084155-8|AAG23358.2|  499|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.9a protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 412 DENNFKYRKRHLYSIKYNPI 353
           D NN + RK HL S+K NP+
Sbjct: 293 DWNNSEIRKNHLKSLKINPV 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,335
Number of Sequences: 27780
Number of extensions: 249707
Number of successful extensions: 472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)