Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G13
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051434-1|BAB33317.1|  159|Homo sapiens KIAA1647 protein protein.     30   4.7  
BC032666-1|AAH32666.1|  660|Homo sapiens OGFR protein protein.         30   6.3  
AK131080-1|BAC85130.1|  563|Homo sapiens FLJ00279 protein protein.     29   8.3  

>AB051434-1|BAB33317.1|  159|Homo sapiens KIAA1647 protein protein.
          Length = 159

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 1   PARGT---RGSRPC-TRSRTCRW-HWTSRS*TGWRTWRCTRPFHWR 123
           PARG    R  RP   R+++C W H  +R  T   T RCTR   WR
Sbjct: 23  PARGNTDMRTRRPTHRRTQSCTWRHVRTRRPTRRPTHRCTRTCTWR 68


>BC032666-1|AAH32666.1|  660|Homo sapiens OGFR protein protein.
          Length = 660

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 1   PARGTRGSRPCTRSRTCRW-HWTSRS-*TGWRTWRCTR 108
           PARGTR     TRSR  R     +RS  TG R WR TR
Sbjct: 16  PARGTRTQGTRTRSRRSRGRRGPARSRMTGSRNWRATR 53


>AK131080-1|BAC85130.1|  563|Homo sapiens FLJ00279 protein protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 16  RGSRPCTRS-RTCRWHWT--SRS*TGWRTWRCTRPFHWRCGRRR 138
           R  R C+RS  TC W WT  +R+   WR  R +    WR  RRR
Sbjct: 16  RPRRGCSRSWTTCWWTWTTSARARATWRRSRRSLTSSWR--RRR 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,439,063
Number of Sequences: 237096
Number of extensions: 913711
Number of successful extensions: 2981
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2981
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)