Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G12
         (507 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36931| Best HMM Match : FabA (HMM E-Value=5.5)                      29   2.2  
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12)                   27   6.7  
SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.7  
SB_6949| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.7  
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  

>SB_36931| Best HMM Match : FabA (HMM E-Value=5.5)
          Length = 702

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 359 YVYYANYSNTFLYHNEEQRLTYLTEDIGFNSYYYYFHSHLPFWW 490
           Y Y+ N + +   H  E R TYLTE+   N Y Y  +  +   W
Sbjct: 65  YHYFMNSTESKYKHFVELRATYLTENRQLNMYDYRENDGIECAW 108


>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 778

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 395 YHNEEQRLTYLTEDI---GFNSYYYYFHSHL 478
           YH+  Q +T +T +I     ++YYY+ H H+
Sbjct: 740 YHHHHQHITIITINILPSSSSTYYYHHHQHI 770



 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 395 YHNEEQRLTYLTEDI---GFNSYYYYFHSHL 478
           YH+  Q +T +T +I     ++Y++Y+H H+
Sbjct: 477 YHHHHQHITIITINILPSSPSTYHHYYHQHI 507


>SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12)
          Length = 316

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 385 VGIVGVIHILLFLFYNSIINSLCIVKNTV 299
           VG + + +ILLF     +I ++C+V NTV
Sbjct: 168 VGFLALNNILLFKVVGCVIITICLVLNTV 196


>SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = -3

Query: 385 VGIVGVIHILLFLFYNSIINSLCIVKNTVLHFSAINLK*SVHINEELWINFI 230
           + I+ +I+I++ +    IIN + I+ N +++   IN+   ++I   + IN I
Sbjct: 24  INIIIIINIIINIIIIIIINIIIIIINIIINIIIINIIIIINIIINIIINII 75


>SB_6949| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 71

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 359 YVYYANYSNTFLYHNEEQRLTYLTEDIGFNSYYY 460
           Y Y  N + +   H  E R TYLTE+   N Y Y
Sbjct: 29  YHYLMNSTESTYKHFVELRATYLTENRQLNMYDY 62


>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 425 GRSTSVLHYGKGK--CWNSWRNTHTALPLLQFHN**PLHR 312
           G  T+   YGKGK   W +W       P LQF    P H+
Sbjct: 665 GCDTTSSFYGKGKLTAWQTWDIYKDVTPTLQFLALNPFHQ 704


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,500
Number of Sequences: 59808
Number of extensions: 304514
Number of successful extensions: 789
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)