Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G11
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 207 1e-52
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 165 7e-40
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 161 1e-38
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 160 2e-38
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 159 4e-38
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 157 2e-37
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 157 2e-37
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 151 9e-36
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 149 6e-35
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 146 4e-34
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 144 1e-33
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 144 2e-33
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 140 2e-32
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 136 4e-31
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 134 2e-30
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 132 4e-30
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 130 2e-29
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 127 2e-28
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 122 8e-27
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 116 3e-25
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 116 5e-25
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 115 9e-25
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 112 5e-24
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 107 2e-22
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 106 3e-22
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 105 6e-22
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 105 8e-22
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 105 8e-22
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 104 1e-21
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 104 1e-21
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 103 4e-21
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 99 4e-20
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 96 6e-19
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 96 6e-19
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 94 2e-18
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 93 3e-18
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 93 3e-18
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 92 8e-18
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 92 1e-17
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 90 3e-17
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 89 7e-17
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 87 2e-16
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 87 3e-16
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 86 5e-16
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 86 7e-16
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 85 9e-16
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 85 2e-15
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 85 2e-15
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 85 2e-15
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 83 5e-15
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 83 6e-15
UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;... 83 6e-15
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 82 1e-14
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 81 1e-14
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 81 2e-14
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 81 2e-14
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 2e-14
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 3e-14
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 80 4e-14
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 4e-14
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 1e-13
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 78 1e-13
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 78 1e-13
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 78 1e-13
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 78 2e-13
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 77 2e-13
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 77 3e-13
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 77 3e-13
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 77 4e-13
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 76 5e-13
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 76 7e-13
UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 76 7e-13
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 76 7e-13
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 75 1e-12
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 75 1e-12
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 75 1e-12
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 75 2e-12
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 75 2e-12
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 75 2e-12
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 74 2e-12
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 73 4e-12
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 73 4e-12
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 4e-12
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 73 4e-12
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 5e-12
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 6e-12
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 72 9e-12
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 72 9e-12
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 72 1e-11
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 72 1e-11
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 72 1e-11
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 71 1e-11
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 71 2e-11
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 71 2e-11
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 71 3e-11
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 69 8e-11
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 69 8e-11
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 69 1e-10
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 68 1e-10
UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 67 2e-10
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 67 2e-10
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 67 3e-10
UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 67 3e-10
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 66 4e-10
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 66 4e-10
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 66 6e-10
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 66 7e-10
UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4... 65 1e-09
UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 65 1e-09
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 65 1e-09
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 65 1e-09
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 65 1e-09
UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 65 1e-09
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 64 3e-09
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 64 3e-09
UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 62 7e-09
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 62 7e-09
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 62 1e-08
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 62 1e-08
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 60 3e-08
UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 60 3e-08
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 60 4e-08
UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n... 59 9e-08
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 59 9e-08
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 58 1e-07
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 58 1e-07
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 58 1e-07
UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobact... 58 1e-07
UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n... 58 2e-07
UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n... 56 6e-07
UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 56 8e-07
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 56 8e-07
UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1; Met... 55 1e-06
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 54 2e-06
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 54 2e-06
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 52 7e-06
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 1e-05
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 51 2e-05
UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 51 2e-05
UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gam... 50 3e-05
UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 49 7e-05
UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2; Actinomycetale... 49 7e-05
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 47 3e-04
UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 45 0.001
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 44 0.003
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 41 0.024
UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma j... 39 0.098
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 38 0.23
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 36 0.91
UniRef50_A5H732 Cluster: Hypoxia-inducible factor 1 alpha; n=6; ... 35 1.6
UniRef50_A7RRZ0 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.5
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 207 bits (506), Expect = 1e-52
Identities = 92/143 (64%), Positives = 117/143 (81%)
Frame = +1
Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
+LFVHRDTPE+NP PF+FT N KR+EA++ YPEGHK A++P+LDLAQR NG WLP
Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95
Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++
Sbjct: 96 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155
Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
G +VG +P F++ EVECLG
Sbjct: 156 LGIKVGETTPDKLFTLIEVECLG 178
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 165 bits (401), Expect = 7e-40
Identities = 78/140 (55%), Positives = 104/140 (74%)
Frame = +1
Query: 157 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAM 336
VHRDT EDNP+I FEF + N+KR E ++A YP +K+GA +PLLDL QR G + S M
Sbjct: 31 VHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQRQLG-FTSISVM 89
Query: 337 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGC 516
+ VA++L++P MRVYEVATFYTM+ R P+GKY++QVCTTTPC L GSD+++KAI +
Sbjct: 90 NYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTPCQLCGSDSIMKAITDYLKI 149
Query: 517 EVGGNSPCGKFSVSEVECLG 576
+ G +P F++ EVECLG
Sbjct: 150 KPGQTTPDKLFTLQEVECLG 169
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 161 bits (391), Expect = 1e-38
Identities = 71/143 (49%), Positives = 103/143 (72%)
Frame = +1
Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
+L H D+P++ P +P+EF+ NQ +V+ +L+ YP +K+ A+IPLLDLAQ+ NGGWLP
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPV 90
Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
SAM+ VA+++ + +RVYEVATFY+MF R +GKYH+ VC TTPC +RGS + A+ +
Sbjct: 91 SAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDH 150
Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
G + G + G FSV E+EC+G
Sbjct: 151 LGVKRGEVTKDGLFSVGEMECMG 173
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 160 bits (389), Expect = 2e-38
Identities = 76/144 (52%), Positives = 98/144 (68%)
Frame = +1
Query: 145 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 324
D+L H +T ++N PF+FT N +VE +LA YP+ +++ A+IPLLDLAQR NGGW+
Sbjct: 35 DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQRQNGGWIS 94
Query: 325 TSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKE 504
AM KVA I + M YEVA+FYTMF R IG+ VQVCTTTPC LRGS ++K K
Sbjct: 95 LRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGSGEIIKTCKS 154
Query: 505 ATGCEVGGNSPCGKFSVSEVECLG 576
G +VG +P KF++ EVECLG
Sbjct: 155 HLGIQVGETTPDNKFTLVEVECLG 178
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 159 bits (386), Expect = 4e-38
Identities = 72/140 (51%), Positives = 101/140 (72%)
Frame = +1
Query: 157 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAM 336
VHR+T +NPSIPFEF+ N KR E ++A YP +K+ A++PLLD+ QR G + S M
Sbjct: 32 VHRNTENNNPSIPFEFSPENMKRAEEVIAKYPPQYKKAAVMPLLDIGQRQLG-YTSISVM 90
Query: 337 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGC 516
+ VA++L +P MRVYEVATFYTM+ R P+G+YH+Q+CTTTPC L GSD +++A++
Sbjct: 91 NYVAKLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQLCGSDGIMEAVQNTLNI 150
Query: 517 EVGGNSPCGKFSVSEVECLG 576
+ G + F++SEVECLG
Sbjct: 151 KPGETTKDNLFTLSEVECLG 170
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 157 bits (381), Expect = 2e-37
Identities = 70/144 (48%), Positives = 102/144 (70%)
Frame = +1
Query: 145 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 324
D +H+DTPE+N + FEF+ K V ++A YP +K+ A+IP+LD+ Q+ NGGWL
Sbjct: 46 DIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLS 105
Query: 325 TSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKE 504
+AM++VA++L++ +RVYEVATFYTMF R IGKYHVQ+C TTPC L+GS + +AI +
Sbjct: 106 LAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITK 165
Query: 505 ATGCEVGGNSPCGKFSVSEVECLG 576
G +G + G F++ E+EC+G
Sbjct: 166 HLGIGIGQTTQDGLFTLGEMECMG 189
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 157 bits (380), Expect = 2e-37
Identities = 77/146 (52%), Positives = 102/146 (69%), Gaps = 2/146 (1%)
Frame = +1
Query: 145 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 324
DSL VHR+ P +NPSIPF F NQ+ ++ +L YP +K+ A++PLLDL QR +G +
Sbjct: 37 DSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLDLGQRQHG-FTS 95
Query: 325 TSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLR--GSDAVLKAI 498
S M++VA +L +P MRVYEVATFYTM+ R P+GKY VQ+CTTTPC L GS +L+AI
Sbjct: 96 ISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPCQLGGCGSTKILEAI 155
Query: 499 KEATGCEVGGNSPCGKFSVSEVECLG 576
+E G G + G F++ EVECLG
Sbjct: 156 QEHLGITPGHTTEDGLFTLLEVECLG 181
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 151 bits (367), Expect = 9e-36
Identities = 70/140 (50%), Positives = 98/140 (70%)
Frame = +1
Query: 157 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAM 336
VHRD PEDN ++ + F A + +V+A+L YP +KR AMIPLLDLAQ+ N G L + M
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIPLLDLAQQQNKGHLTLAMM 85
Query: 337 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGC 516
+ +A++L + +RVYEVATFY+MF R+ +GK HV VC TTPC LRGS + KA++E G
Sbjct: 86 NHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHVMVCGTTPCMLRGSREIEKALEEWMGV 145
Query: 517 EVGGNSPCGKFSVSEVECLG 576
+ + CG F++ E+EC+G
Sbjct: 146 KKFETTACGTFTLGEMECMG 165
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 149 bits (360), Expect = 6e-35
Identities = 67/130 (51%), Positives = 88/130 (67%)
Frame = +1
Query: 187 SIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLP 366
S F F N E ++ YP KR A++PLLDLAQR NGGWLP A+ VA +L +P
Sbjct: 2 STNFTFDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMP 61
Query: 367 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGK 546
MR YEVATFY+MF + +GKYH+QVCTTTPCWL GSD ++K ++ G ++ + K
Sbjct: 62 YMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQK 121
Query: 547 FSVSEVECLG 576
F++SE+ECLG
Sbjct: 122 FTLSEIECLG 131
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 146 bits (353), Expect = 4e-34
Identities = 67/144 (46%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
Frame = +1
Query: 148 SLFV-HRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 324
++FV HR+ +++ S+PF+FT N K++EA+LA +P K+ IPLL LAQ+ N +L
Sbjct: 19 NIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIPLLMLAQKQNNNFLS 78
Query: 325 TSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKE 504
SAM K+A+IL +P M VYE A+FY+MF R +GK+H+QVC TTPC L GS ++K I++
Sbjct: 79 LSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQVCGTTPCQLCGSKDIIKTIEQ 138
Query: 505 ATGCEVGGNSPCGKFSVSEVECLG 576
+ G + G +++ EVECLG
Sbjct: 139 KLNIKNGETTADGLYTLQEVECLG 162
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 144 bits (350), Expect = 1e-33
Identities = 66/142 (46%), Positives = 96/142 (67%)
Frame = +1
Query: 151 LFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTS 330
L H +TPE+N FEFT N K + +LL YP+ +K+ A++ LL LAQ+ NG +L +
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVLYLLHLAQKQNGNFLTLA 85
Query: 331 AMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEAT 510
AM+KVA+IL + + VYEVA FY+MF R +GK +Q+C TTPC L G+ ++KA ++
Sbjct: 86 AMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRLQICGTTPCLLCGARDIMKACEDHL 145
Query: 511 GCEVGGNSPCGKFSVSEVECLG 576
G ++GG + G F++ EVECLG
Sbjct: 146 GIKMGGTTKDGMFTLEEVECLG 167
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 144 bits (348), Expect = 2e-33
Identities = 64/127 (50%), Positives = 88/127 (69%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F F+ N + V +LA YP KR A++PLL L QR + W+P +AM VA++L LP ++
Sbjct: 24 FCFSEENSREVARILAKYPASRKRSAVLPLLHLVQRQHENWIPIAAMDHVAQLLGLPVIK 83
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
VYEVA+FY+MF P+GK+ ++VC TTPCWLRGSD +++A K G +VG + KFS+
Sbjct: 84 VYEVASFYSMFNTAPVGKHTIRVCRTTPCWLRGSDCLIEAAKRELGIKVGHKTEDNKFSL 143
Query: 556 SEVECLG 576
EVECLG
Sbjct: 144 DEVECLG 150
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 140 bits (339), Expect = 2e-32
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 6/133 (4%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNG-----GWLPTSAMHKVAEILN 360
F F +++R+E +LA YP + A++PLLDLAQR G W+P +AM ++A L
Sbjct: 20 FSFDVQSEQRIEIILAKYPPARRASAVMPLLDLAQRQMGRETGSAWIPRAAMDEIARRLG 79
Query: 361 LPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCE-VGGNSP 537
+ +RVYEVATFY M+ RP+G++H+Q+CTTTPCWLRGSD V+ A + ATG + G S
Sbjct: 80 MAPIRVYEVATFYFMYNTRPVGRHHLQLCTTTPCWLRGSDEVVAACRSATGIQGWGETSE 139
Query: 538 CGKFSVSEVECLG 576
G F+++EVECLG
Sbjct: 140 DGMFTMTEVECLG 152
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 136 bits (329), Expect = 4e-31
Identities = 69/133 (51%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNG------GWLPTSAMHKVAEIL 357
F +TA N ++ +A++A YP G +R A++PLLDLAQR G GWLP + VA L
Sbjct: 20 FAWTAENAEKAKAVIARYPAGRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQL 79
Query: 358 NLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSP 537
++P +R YEVATFYTM+ P+G+YHVQVC TTPC LRGSD V A K G G +P
Sbjct: 80 DMPFIRAYEVATFYTMYNLAPVGRYHVQVCGTTPCLLRGSDDVTAACKN-RGMVKGKTTP 138
Query: 538 CGKFSVSEVECLG 576
G F++SEVEC+G
Sbjct: 139 DGLFTLSEVECMG 151
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 134 bits (323), Expect = 2e-30
Identities = 58/140 (41%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Frame = +1
Query: 160 HRDTPEDNPSIPFEFTAPNQKRVE-ALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAM 336
H++T DN IP++FT + +++ +L +P G + A IPLL LAQ+ GG++P +AM
Sbjct: 40 HQNTDYDNTRIPWDFTTSSYEKIHNEILPKFPRGRRISATIPLLHLAQQQQGGYIPVTAM 99
Query: 337 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGC 516
+K+A+I +P M V+E TFY+MF R P+GKYH+Q C TTPC L G+D +++
Sbjct: 100 YKIAKICEVPPMHVFETVTFYSMFNRHPVGKYHIQFCRTTPCMLCGADELMERTMHYLNV 159
Query: 517 EVGGNSPCGKFSVSEVECLG 576
+ G + G ++ E+ECLG
Sbjct: 160 RMHGTTSDGLITIGEMECLG 179
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 132 bits (320), Expect = 4e-30
Identities = 63/134 (47%), Positives = 87/134 (64%)
Frame = +1
Query: 175 EDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEI 354
E ++ FEF+ NQ+RV+ALLA YP+ +GA++PLLD+AQR G WL SA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 355 LNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNS 534
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D + +A K+ E G +
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145
Query: 535 PCGKFSVSEVECLG 576
P +F++ E C+G
Sbjct: 146 PDMQFTLKEDYCMG 159
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 130 bits (315), Expect = 2e-29
Identities = 61/128 (47%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Frame = +1
Query: 199 EFTAPNQKRVEALLAI--YPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRM 372
EF+ N+ V A I YP G + A++ +LDLAQ N WL S + VA +L +P +
Sbjct: 8 EFSFSNETLVIAKKIINNYPAGKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYI 67
Query: 373 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS 552
+VYE+A+FYTMF +P+GKYH+Q+C TTPCWLRGSD ++ K+ E G S F+
Sbjct: 68 KVYEIASFYTMFNLQPVGKYHIQICGTTPCWLRGSDDIMNFCKKLLKIETGKTSQDKLFT 127
Query: 553 VSEVECLG 576
VSE ECLG
Sbjct: 128 VSETECLG 135
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 127 bits (306), Expect = 2e-28
Identities = 65/138 (47%), Positives = 82/138 (59%)
Frame = +1
Query: 163 RDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHK 342
R P + F FT N + EA +A YPEG + A+IPLL AQ NGGWLP A+
Sbjct: 5 RLAPAEQQPAAFAFTPENARWAEAQIAKYPEGRQASAVIPLLWRAQEQNGGWLPQKAIEA 64
Query: 343 VAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEV 522
VA+ L +P +RV EVATFYTMF P+G+Y +QVC T PC + G+ + + + G
Sbjct: 65 VADELGMPHIRVLEVATFYTMFALEPVGRYWIQVCGTVPCDVCGAKELKHYLHDRLG-PA 123
Query: 523 GGNSPCGKFSVSEVECLG 576
G SP G FS EVECLG
Sbjct: 124 GHVSPDGNFSWLEVECLG 141
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 122 bits (293), Expect = 8e-27
Identities = 59/127 (46%), Positives = 80/127 (62%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F+F + K+ L YP K A++PLL +AQ+ GG +P +AM+ +A+ L++ +
Sbjct: 18 FKFNKESLKQANDALNRYPSDRKSSAVMPLLHIAQKQCGGLIPIAAMNYIADFLDMKPIH 77
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
VYEVA FY+M+ GKY VQVC TTPCWL GSD VLKA KE +VG + F++
Sbjct: 78 VYEVAKFYSMYNLSVTGKYLVQVCRTTPCWLCGSDNVLKACKEFLNIDVGNTTDDNLFTL 137
Query: 556 SEVECLG 576
EVECLG
Sbjct: 138 KEVECLG 144
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 116 bits (280), Expect = 3e-25
Identities = 50/118 (42%), Positives = 75/118 (63%)
Frame = +1
Query: 220 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFY 399
K ++ LA YP KR A++P L Q+ N GWL +AM+ +A+ L LPR+ VYEVATFY
Sbjct: 16 KEIDRWLAKYPTDQKRSAVVPALLFVQKQNNGWLSKAAMNALADYLQLPRIWVYEVATFY 75
Query: 400 TMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
M+ +P+GK+ + +C PC+LRGSD ++ +KE G + + G F++ VEC+
Sbjct: 76 DMYNLKPMGKHKISICQNVPCFLRGSDEIVACVKERLGIDFDETTSDGLFTLKSVECM 133
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 116 bits (278), Expect = 5e-25
Identities = 58/127 (45%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
Frame = +1
Query: 199 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRV 378
+F +Q +V+A+LA YP+ +KR A IPLL L QR NGG+L T + +++I+ + RV
Sbjct: 24 DFKFSDQSKVDAILAKYPKENKRAATIPLLHLGQRENGGYLTTGVLQAISKIVGVTAGRV 83
Query: 379 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEV-GGNSPCGKFSV 555
+E A FY+MF +P + V+VC C+L GSD V +AI++ATG G SP G+F++
Sbjct: 84 HETACFYSMFRFQPPNNHIVEVCKGLSCYLTGSDNVKEAIQKATGGTFKEGKSPDGQFTL 143
Query: 556 SEVECLG 576
EVECLG
Sbjct: 144 EEVECLG 150
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 115 bits (276), Expect = 9e-25
Identities = 59/127 (46%), Positives = 75/127 (59%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F FT N +A YPEG + A+IPLL AQ NGGWLP A+ VA+ L +P +R
Sbjct: 16 FAFTPENADWARGQIAKYPEGRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIR 75
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
V EVATFYTMF P+G++ +QVC T PC G+ + ++ E G G + G FS
Sbjct: 76 VLEVATFYTMFALEPVGRFWIQVCGTVPCDCCGAKELKASLHERLG-PSGKVTADGNFSW 134
Query: 556 SEVECLG 576
EVECLG
Sbjct: 135 LEVECLG 141
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 112 bits (270), Expect = 5e-24
Identities = 47/127 (37%), Positives = 82/127 (64%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F+F+ + K+++ + A YPEG ++ A++P+L +AQ GGWLP M VA +L++ +
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLPVLHMAQDELGGWLPAPLMDYVASLLDITPIE 67
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
VYEVA+FY+M+ +P+GK + C T PC L G + +++ ++ G ++ S G+F++
Sbjct: 68 VYEVASFYSMYNLKPVGKCMFEFCQTGPCCLNGVEELIEYTEDKLGIKLNQTSADGRFTI 127
Query: 556 SEVECLG 576
VEC+G
Sbjct: 128 KAVECMG 134
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 107 bits (257), Expect = 2e-22
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F F ++ +V+ LA YPE K A+IPLL +AQ+ + W+ AM ++A +P +R
Sbjct: 14 FAFNEKSEAKVKFWLAKYPEERKASAVIPLLWIAQKQDN-WVSEPAMREIAARCGMPYIR 72
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGN--SPCGKF 549
VYEVATFYTMF GK+ +QVC TTPCWLRG+D LKA+ E + G S G
Sbjct: 73 VYEVATFYTMFNLEQTGKHLIQVCGTTPCWLRGADD-LKAVCEKKIGKKGREHVSSDGML 131
Query: 550 SVSEVECLG 576
+ EVECLG
Sbjct: 132 AWEEVECLG 140
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 106 bits (255), Expect = 3e-22
Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +1
Query: 157 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAM 336
+H+D PE F FT NQK EA + YPEG + A+IPLL AQ G WL A+
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPLLWRAQEQEG-WLTRPAI 58
Query: 337 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAVLKAIKEATG 513
+A +L++ +R EVATFY MF P+G HVQ+C TT C + G++ ++ +E
Sbjct: 59 EHIAAMLDMAYIRALEVATFYFMFQLAPVGSVAHVQICGTTSCMICGAEDLIAVCQEMIA 118
Query: 514 CEVGGNSPCGKFSVSEVECLG 576
+ S GKFS EVECLG
Sbjct: 119 PKAHEVSADGKFSWEEVECLG 139
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 105 bits (253), Expect = 6e-22
Identities = 50/118 (42%), Positives = 72/118 (61%)
Frame = +1
Query: 223 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYT 402
R+E L + YPE ++ A++P+L Q + WL KVAEIL++ + VYEV +FYT
Sbjct: 19 RIEELCSHYPEDKRKSALLPVLHEVQDAHENWLSIELQDKVAEILHIKPVEVYEVVSFYT 78
Query: 403 MFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
M+ RRPIGKY + C T+PC L G++ ++ + G +VG + G F V VECLG
Sbjct: 79 MYNRRPIGKYMFEFCQTSPCCLNGTENLMDYTCDKLGVKVGEPTADGLFEVRGVECLG 136
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 105 bits (252), Expect = 8e-22
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F F A N+ +A YPEG ++ A+IPLL AQ G W+ +++ VA +LN+P +R
Sbjct: 16 FAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQEQEG-WVTKASIEYVAAMLNMPLIR 74
Query: 376 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS 552
V EVATFYT F +P+G + H+QVC TTPC LRGS+A++ + + + G S
Sbjct: 75 VLEVATFYTQFQLKPVGSRAHIQVCGTTPCMLRGSEALMDVCRHKIHHDPFELNADGTLS 134
Query: 553 VSEVECLG 576
EVEC G
Sbjct: 135 WEEVECQG 142
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 105 bits (252), Expect = 8e-22
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F F+ N EA + YPEG ++ A+IPLL AQ +G W+ +A+ VA++L + +R
Sbjct: 16 FAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIR 74
Query: 376 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS 552
V EVATFYT F +P+G + HVQVC TTPC LRG++ ++K K+ E + G S
Sbjct: 75 VLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLS 134
Query: 553 VSEVECLG 576
EVEC G
Sbjct: 135 WEEVECQG 142
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 104 bits (250), Expect = 1e-21
Identities = 51/120 (42%), Positives = 79/120 (65%)
Frame = +1
Query: 217 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATF 396
++ +EA A YP+ +R A++P L +AQ+ +G LP + +VA+IL + R+ VYE+ATF
Sbjct: 4 REEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATF 60
Query: 397 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
YT+F PIG++H+Q+C C L GS+A+L ++ G G +P G F++S VECLG
Sbjct: 61 YTLFHTEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLG 120
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 104 bits (250), Expect = 1e-21
Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
FEFT N + A + YPEG ++ A+IP+L AQ G WL A+ A++L +P +R
Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIR 71
Query: 376 VYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS 552
EVATFY MF +P+G H+Q+C TT C + G++ +++ KE E S G+FS
Sbjct: 72 ALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFS 131
Query: 553 VSEVECLG 576
EVECLG
Sbjct: 132 WEEVECLG 139
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 103 bits (246), Expect = 4e-21
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Frame = +1
Query: 190 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPR 369
+ F F N + + YP+G ++ A+IPLL LAQ G W+ +A+ ++++L +PR
Sbjct: 14 VSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQEQEG-WVTKAAIETISDMLGMPR 72
Query: 370 MRVYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGK 546
+R EVATFYT + P+G + H+QVC TTPC LRGS+A++ + + + G
Sbjct: 73 IRGLEVATFYTQYQLNPVGTRAHIQVCGTTPCMLRGSEALMDVCRSKIHHDQFHTNDKGT 132
Query: 547 FSVSEVECLG 576
S EVECLG
Sbjct: 133 LSWEEVECLG 142
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 99 bits (238), Expect = 4e-20
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +1
Query: 145 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 324
DSL VHR+ P +NPSIPF+F N K ++ +L YP +K+ A++P+LDL QR + G+
Sbjct: 134 DSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPPQYKKAAVMPILDLGQRQH-GFTS 192
Query: 325 TSAMHKVAEILNLPRMRVYEVATFYTMF 408
S M++VA +L +P MRVYEVATFYTM+
Sbjct: 193 ISVMNEVARLLEMPPMRVYEVATFYTMY 220
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 95.9 bits (228), Expect = 6e-19
Identities = 48/127 (37%), Positives = 75/127 (59%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
F+ + V++ LA Y K A+IP L +AQ+ N G++ + +++++++P R
Sbjct: 4 FKLSDSGLAAVKSELARYEA--KESAIIPSLYIAQKENNGFITPEIIRTLSQVMDIPEAR 61
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
+ EV FYTMF ++P+GKYHVQVCT C L G + K I G + + G+F+V
Sbjct: 62 INEVFKFYTMFNQKPVGKYHVQVCTNISCALEGGREMAKHICHELGVKFDQVTADGRFTV 121
Query: 556 SEVECLG 576
S+VECLG
Sbjct: 122 SKVECLG 128
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 95.9 bits (228), Expect = 6e-19
Identities = 44/113 (38%), Positives = 65/113 (57%)
Frame = +1
Query: 238 LAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRR 417
+A YP HK+ A++ L +A + GW+ + VA+IL +P + V EVATFY M+ +
Sbjct: 19 IAKYPAEHKQSAVMACL-IAAQTEVGWVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTK 77
Query: 418 PIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
PIGKY + +CT PC L + +KE G +PCG F++ E EC+G
Sbjct: 78 PIGKYKLVICTNLPCQLTHGETAATYLKETLGIGFNETTPCGTFTLKEGECMG 130
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 93.9 bits (223), Expect = 2e-18
Identities = 44/119 (36%), Positives = 68/119 (57%)
Frame = +1
Query: 220 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFY 399
++++ +A YP K+ A++ L +AQ G WL T M +A+ L +P + VYEVATFY
Sbjct: 12 RKIDREVAKYPADRKQSAVMSALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFY 70
Query: 400 TMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
M+ +P+GKY + VCT PC L G + +K+ G + G F++ E EC+G
Sbjct: 71 NMYNLKPVGKYKLTVCTNLPCALSGGNQTADYLKQKLGIGFNETTTDGLFTLKEGECMG 129
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 93.5 bits (222), Expect = 3e-18
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +1
Query: 226 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTM 405
++ LA +P KR A++ L AQ N GWL + VA+ L++P + YEVATFY+M
Sbjct: 27 IDHWLAKFPADQKRSALLQGLYAAQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSM 86
Query: 406 FIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGK-FSVSEVECL 573
F R +G+++V CT CWL G++ ++ +E GC++G ++ G+ + E ECL
Sbjct: 87 FETRKVGRHNVAFCTNVSCWLNGAEDLVSYAEEKLGCKLGQSTADGRVYLKCEEECL 143
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 93.5 bits (222), Expect = 3e-18
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Frame = +1
Query: 208 APNQKRVEALLAIYPEGH--KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVY 381
A ++R++ LA YP+ + A+IP L + Q NGGWL S + A+ + +PR +
Sbjct: 13 ADQRRRIDHWLAKYPDDEQGRASAIIPALHILQDDNGGWLERSHVAAAADYIGMPRASAF 72
Query: 382 EVATFYTMF-IRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS-V 555
EVATFY+MF + P+G++ V CT C L G+D ++ +E G +G +P G+ + V
Sbjct: 73 EVATFYSMFHLDEPVGRHKVNFCTNISCCLNGADELVAYAEEKLGIRLGETTPDGRITLV 132
Query: 556 SEVECL 573
E ECL
Sbjct: 133 REEECL 138
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 92.3 bits (219), Expect = 8e-18
Identities = 45/116 (38%), Positives = 74/116 (63%)
Frame = +1
Query: 226 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTM 405
+EA++A YP HK A++PLL +AQ G+L +AM +VAE+L++P V+EVA FY++
Sbjct: 11 IEAIIARYP--HKPSAVLPLLFIAQ-DEYGYLTEAAMREVAELLDMPPTDVFEVAGFYSL 67
Query: 406 FIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
+P+GK+ +QVC PC G++ ++ ++ G V +P G F++ V+CL
Sbjct: 68 LYEQPVGKWVLQVCDDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRVKCL 123
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/126 (38%), Positives = 78/126 (61%)
Frame = +1
Query: 199 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRV 378
E TAP + ++ YP +R A++P L LAQ G+L +A +AEIL++P + V
Sbjct: 13 ELTAP----IADIVKCYPT--QRSAIMPALYLAQ-DTYGFLDETAYRAIAEILDIPEIWV 65
Query: 379 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVS 558
+E+A+FYT++ + IGKY++Q+CT PC LRG+ +L ++ G G S G F+++
Sbjct: 66 FELASFYTLYKNKKIGKYNLQLCTNVPCMLRGAYDLLGHLQTRLGINKGDTSTDGLFTLT 125
Query: 559 EVECLG 576
VEC+G
Sbjct: 126 TVECIG 131
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 90.2 bits (214), Expect = 3e-17
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +1
Query: 226 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTM 405
+ LL YPE K+ A++P L LAQ+ N L + VAE++++P + Y +AT+Y+M
Sbjct: 10 IHRLLGRYPE--KQSALMPALMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSM 67
Query: 406 F-IRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
+ + +P+G+YH+QV T P L G+ +L +++ G +P G F++SEVECL
Sbjct: 68 YNVEKPVGRYHLQVDTNIPATLMGAGEILDHLEKTLNIRAGETTPDGLFTLSEVECL 124
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 89.0 bits (211), Expect = 7e-17
Identities = 47/120 (39%), Positives = 68/120 (56%)
Frame = +1
Query: 217 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATF 396
+ R E LL YP G +R AMIP+L AQ G + + +VA + + ++V EV T+
Sbjct: 8 EARFEKLLTSYPPGRQRSAMIPMLMYAQ-DELGCVSDELIAEVARRIGVTPLQVNEVLTY 66
Query: 397 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
Y+M R+P+GKYHVQVCT C L D + + + G + G+FS+ EVEC+G
Sbjct: 67 YSMLHRKPLGKYHVQVCTNISCLLHDGDKLYEHTCKKLGITHKEVTADGQFSIEEVECMG 126
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/107 (39%), Positives = 62/107 (57%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
G+ G +I +L AQ +G +LP +A L +P +VY V TFYT F P GK+
Sbjct: 22 GNNAGELINILHEAQHLHG-YLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHP 80
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ VC T C++RGS+ +L+ K G EVG +P GK+S+ + C+G
Sbjct: 81 ISVCMGTACYVRGSEKLLEEFKRVLGIEVGETTPDGKYSLDCLRCVG 127
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 87.0 bits (206), Expect = 3e-16
Identities = 48/129 (37%), Positives = 66/129 (51%)
Frame = +1
Query: 190 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPR 369
+P E + + +L YP K AM+P L + Q G +L + A+ L
Sbjct: 30 LPREKVEHFDRDLAEVLRRYPPDRKAAAMLPALRIGQEIFG-YLTPAVQRLAADRLGTSP 88
Query: 370 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKF 549
R EVATFY MF RPIG++ V+VCT C L G D + + +K G GG S G+
Sbjct: 89 ARAEEVATFYVMFNTRPIGRHLVEVCTNVSCCLTGGDRLFEYLKHKYGVTNGGTSQDGRV 148
Query: 550 SVSEVECLG 576
++ EVECLG
Sbjct: 149 TLREVECLG 157
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 86.2 bits (204), Expect = 5e-16
Identities = 42/108 (38%), Positives = 64/108 (59%)
Frame = +1
Query: 247 YPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIG 426
YP+ R A++P+L L Q +G P + AE+L + +V VATFYTM+ + P G
Sbjct: 51 YPDS--RSALLPILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAG 107
Query: 427 KYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVEC 570
++H+ VCTT C + G + VL +++ G + G +P GKFS+ VEC
Sbjct: 108 QHHIGVCTTALCAVMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVEC 155
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 85.8 bits (203), Expect = 7e-16
Identities = 46/125 (36%), Positives = 71/125 (56%)
Frame = +1
Query: 202 FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVY 381
F+ + L+ YP + A++P+L +AQ + G+L VA++L L M+V
Sbjct: 12 FSEARLAEIAELVKRYPGA--QSALMPVLYMAQE-DFGYLSMDVQQHVADVLGLRLMQVR 68
Query: 382 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSE 561
EV TFYTMF +P G Y ++VCT C L G++ ++ + E G +VG + G F+V+E
Sbjct: 69 EVVTFYTMFREKPCGTYLLEVCTNAGCMLNGANELVAHMCETLGIKVGETTDDGLFTVAE 128
Query: 562 VECLG 576
VEC G
Sbjct: 129 VECAG 133
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 85.4 bits (202), Expect = 9e-16
Identities = 45/118 (38%), Positives = 69/118 (58%)
Frame = +1
Query: 220 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFY 399
+R++ ++ YP KR A +PLL L Q + G++ AM +A+ L + R+ V EV TFY
Sbjct: 9 QRIDEVITHYPV--KRSATLPLLHLIQE-DAGYISDEAMEWIADKLGIERIHVLEVVTFY 65
Query: 400 TMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
MF R+PIG+ H++VC T C L G V + +++ + SP G+ +V VECL
Sbjct: 66 PMFRRKPIGRRHIKVCRTLSCALMGGYKVCETMQKEFDTHLNEVSPDGEVTVEFVECL 123
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = +1
Query: 226 VEALLAIYPEGHKRGAMIPLLDLAQRXNGG-WLPTSAMHKVAEILNLPRMRVYEVATFYT 402
VEA+L YPEG +R A++PLL LA R G ++ S + VAEI + V V +FYT
Sbjct: 18 VEAILRRYPEGRERSAILPLLHLAMREREGRYIAQSDIEAVAEICGVAPSYVQSVCSFYT 77
Query: 403 MFIRRPIGKYHVQVCTTTPC-WLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEV-ECL 573
MF R+P+GKY + VC C L G +++ +++ G +VG +P G ++ ECL
Sbjct: 78 MFRRQPVGKYLITVCGNMACHLLAGGSQLVEHMEKTLGIKVGETTPDGLITLEVTGECL 136
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/115 (33%), Positives = 69/115 (60%)
Frame = +1
Query: 169 TPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVA 348
T E N + F++ ++ ++ +A YP ++ A++ L + Q NGGWL T+ M VA
Sbjct: 3 TTEANNKVEL-FSSEVREEIDRWVAKYPAEWRQSAVMAALRIVQDANGGWLTTALMDDVA 61
Query: 349 EILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATG 513
L++ + VYEVATFY+M+ +P+GK+ + +CT C + SD +++ +++ G
Sbjct: 62 AYLDMAPIAVYEVATFYSMYELKPVGKHKICICTNVSCMINNSDRIVEHLEKRLG 116
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/120 (33%), Positives = 67/120 (55%)
Frame = +1
Query: 217 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATF 396
+K+++A +A YP+ K A++ L + Q N L + VA+ L++P + V EVATF
Sbjct: 7 KKQIDAWIAKYPKDRKSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVATF 66
Query: 397 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
Y + + +GKY ++ C C L G+D ++ ++ G + +P G SV +VECLG
Sbjct: 67 YENYNHKKVGKYVIRFCHNISCMLNGADDLIAYLENKLGVQTDEVTPDGLISVKKVECLG 126
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 83.0 bits (196), Expect = 5e-15
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 KRGAMIPLLDLAQ-RXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
+R ++ LL Q ++P +AE LN+P +VYEV TFYTMF +P GKY +
Sbjct: 20 ERDMLVYLLHRVQDHYQSHYIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYII 79
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+VCT+ PC + G +++ +K+ G + G + G F++ E CLG
Sbjct: 80 RVCTSLPCHVPGGREIVQFLKQKLGVDFGETTKDGLFTLEETGCLG 125
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 82.6 bits (195), Expect = 6e-15
Identities = 42/124 (33%), Positives = 62/124 (50%)
Frame = +1
Query: 202 FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVY 381
F+ + ++A YP G R A++PLL L Q G + + A++L + R V
Sbjct: 3 FSPETHAAAQEIIARYPAGRSRSALLPLLHLVQAEQG-CVTAQGVAFCADVLGITRAEVG 61
Query: 382 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSE 561
VATFYTM+ R P+G Y V VCT C L G + V + + + G +P G ++
Sbjct: 62 AVATFYTMYKRHPVGDYLVSVCTNLSCALLGGEDVYERVSKLLGVGHDETTPDGSITLEH 121
Query: 562 VECL 573
ECL
Sbjct: 122 AECL 125
>UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Clostridium cellulolyticum H10
Length = 163
Score = 82.6 bits (195), Expect = 6e-15
Identities = 38/104 (36%), Positives = 60/104 (57%)
Frame = +1
Query: 265 RGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 444
RGA+IP+L Q G +L + +++E LN+ +Y V TFYT F P G++ + +
Sbjct: 29 RGALIPVLHEVQEVYG-YLSEDVLKEISEKLNVSLAEIYGVVTFYTQFSLNPKGRFKINI 87
Query: 445 CTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C T C+++GS +L+ KE G +VG + GKFS+ C+G
Sbjct: 88 CMGTACYVKGSGEILEKFKEKLGIDVGQCTEDGKFSLDACRCIG 131
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/102 (40%), Positives = 58/102 (56%)
Frame = +1
Query: 271 AMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 450
++IPLL Q G+LP + ++A L +P RVY VATFY F P+GKY V+VC
Sbjct: 17 SLIPLLQRTQE-RFGYLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKVCH 75
Query: 451 TTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C + G+ + +A+KE G E G + G ++ V CLG
Sbjct: 76 GTACHVNGAVNIAQALKEELGIEEGQTTEDGLVTLERVACLG 117
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/98 (40%), Positives = 60/98 (61%)
Frame = +1
Query: 283 LLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 462
LL + + N WLP A++KV++ LN+P RVY VATFY +F P GK++V VC T C
Sbjct: 35 LLKIQKEYN--WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVSVCVGTAC 92
Query: 463 WLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ G+ +L ++++ G + G + KFS+ V CLG
Sbjct: 93 HVFGAPKILDRLEKSLGIKAGETTSDLKFSLETVNCLG 130
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/119 (38%), Positives = 67/119 (56%)
Frame = +1
Query: 220 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFY 399
++VE +L Y G+KR +I +L Q +LP ++ V+ + +P ++Y VATFY
Sbjct: 9 EKVEEILKKY--GYKRENLIKILLEIQEIYR-YLPEDVINYVSTAMGIPPAKIYGVATFY 65
Query: 400 TMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
F +P GKY + VC T C + GS VLKAI+E TG G + FS+ +V CLG
Sbjct: 66 AQFSLKPKGKYTIMVCDGTACHMAGSPEVLKAIEEETGLTPGNVTEDLMFSLDQVGCLG 124
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 80.6 bits (190), Expect = 2e-14
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Frame = +1
Query: 202 FTAPNQKRVEA----LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPR 369
FT QK+ +A +L+ YP K M+P L L Q G W P + VA+ L +
Sbjct: 6 FTPEEQKKFDAGISEILSHYPPDRKSAGMLPALRLLQDLKG-WCPPEGIRLVAKNLEVTP 64
Query: 370 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKF 549
R YEVA+FY M+ + GKY + VCT C LRG++ +L ++ G + G + F
Sbjct: 65 ERAYEVASFYVMYHLKKPGKYTIDVCTNLSCSLRGAEKMLAYLENKLGLKAGEANE--TF 122
Query: 550 SVSEVECL 573
++ E ECL
Sbjct: 123 TLRETECL 130
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 80.6 bits (190), Expect = 2e-14
Identities = 43/128 (33%), Positives = 66/128 (51%)
Frame = +1
Query: 193 PFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRM 372
P E P +K E I +GA+I +L AQ G +LP +A L +P
Sbjct: 12 PVEQEFPKEKYDELESFINSLETTKGALIEILHKAQHIFG-YLPRDVQLFIARKLGIPGA 70
Query: 373 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFS 552
VY V +FY+ F +P GK+ + VC T C++RG+D +++ KE G E + G F+
Sbjct: 71 EVYGVVSFYSYFTTKPSGKHTISVCMGTACFVRGADKIVEKFKERLGIESNETTEDGLFT 130
Query: 553 VSEVECLG 576
+ +V C+G
Sbjct: 131 IKDVRCIG 138
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/102 (36%), Positives = 63/102 (61%)
Frame = +1
Query: 271 AMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 450
A+I +L +Q G +LP + +A+ L L +VY V +FY F +P GKY V VC
Sbjct: 26 ALIEVLHQSQELVG-YLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVCM 84
Query: 451 TTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C+++G+ A+L+ +++ G +VG + G+F++++V CLG
Sbjct: 85 GTACFVKGAPAILERLEQELGTKVGDTTADGRFTINQVRCLG 126
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/103 (34%), Positives = 62/103 (60%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
G++I +++ AQ G +LP +++ + +P ++ ++TFY+ F +P GKY + +C
Sbjct: 37 GSLIAVMNDAQEIFG-YLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC 95
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C++RG+ +L+ IKE G EVG + GKFS+ CLG
Sbjct: 96 MGTACYVRGAAMLLEKIKEKLGIEVGETTEDGKFSLEPTRCLG 138
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 79.8 bits (188), Expect = 4e-14
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
+RG++I +L AQ G +L VA LN+ R VY V +FY+ FI +PIG+Y +
Sbjct: 41 RRGSLIQILHRAQHLFG-YLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VCT T C+++G+ VL K G ++P GKF + + C+G
Sbjct: 100 VCTGTACFVKGAPKVLDEFKRRLEIREGESTPDGKFFLGALRCVG 144
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/121 (33%), Positives = 69/121 (57%)
Frame = +1
Query: 214 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVAT 393
NQ +++AL A Y +G+ G ++ + + + + G+LP + + AE L +P VY VAT
Sbjct: 10 NQSKLDALFAQY-KGNPNGLIVVMAAIQE--SQGYLPKDLLVRTAEELGVPLSDVYGVAT 66
Query: 394 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
FY F RP G++ V +C T C+++G+ V +++ G + G + +FS+ V CL
Sbjct: 67 FYAAFSLRPRGRHSVNLCLGTACYVKGAPEVQSMLEKEMGIKAGNTTEDRRFSLDLVRCL 126
Query: 574 G 576
G
Sbjct: 127 G 127
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 78.2 bits (184), Expect = 1e-13
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = +1
Query: 229 EALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMF 408
E ++A YP+ KR A++PLL L Q +G ++ + AE+L L R V VATFYT +
Sbjct: 36 ELVVAKYPQ--KRSALLPLLHLVQSVDG-YVTGRGIDFCAEVLELSRAEVSGVATFYTQY 92
Query: 409 IRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVEC 570
R P G+Y V VCT T C + G D + ++ E G + GK ++ +EC
Sbjct: 93 KRHPNGEYTVGVCTNTLCAIMGGDEIWDSVSEHLGIGHDETTDDGKVTLERIEC 146
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
++ GA++ +L Q G ++P A+ V EIL +P+ ++Y V TFY+ F + P GK+ +
Sbjct: 23 NREGAVVQILQKVQEKYG-YVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVL 81
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
++C T C +RG+ ++ +KE E G N+ F++ V CLG
Sbjct: 82 KICVGTACHVRGAGLLVDKVKEELHIEPGENTEDMLFTLEPVACLG 127
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 78.2 bits (184), Expect = 1e-13
Identities = 43/118 (36%), Positives = 70/118 (59%)
Frame = +1
Query: 223 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYT 402
+++ +LA Y +G K GA+IP+L AQ G +L + +AE L++P ++Y V TFY
Sbjct: 21 QLDEILAKY-QGVK-GALIPVLQEAQNAYG-YLSKEVIEYIAEKLDIPVSQIYGVVTFYA 77
Query: 403 MFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
F P G+ ++VC T C +RG+ A+LKA+++ GG + KF++ V C+G
Sbjct: 78 QFHLNPRGRNIIRVCQGTACHVRGAKAILKALEDNLKITAGGTTADLKFTLETVACIG 135
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/104 (36%), Positives = 59/104 (56%)
Frame = +1
Query: 265 RGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 444
R A + ++ QR + GWL A+ + AE+L L ++V E+ATFY M RRP+GK + V
Sbjct: 21 REAAVDVMKALQR-HYGWLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHV 79
Query: 445 CTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C + CW G ++++ + A E GG + G F++ CLG
Sbjct: 80 CDSISCWALGGESLMAHLAAALNIEPGGTTADGLFTLLPCCCLG 123
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 77.4 bits (182), Expect = 2e-13
Identities = 42/127 (33%), Positives = 70/127 (55%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
FEF + +++ + +P+ KR A++ L Q G ++P ++ +A++L LP
Sbjct: 6 FEFPEELKTKLQEHINYFPK--KRQAILLCLHEIQNYYG-YIPPESLKPLADMLELPLNH 62
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
V V FY MF R KY ++VC + C L G++ +LKA++ G + G +P GKF +
Sbjct: 63 VEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKI 122
Query: 556 SEVECLG 576
V+CLG
Sbjct: 123 VPVQCLG 129
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/110 (36%), Positives = 59/110 (53%)
Frame = +1
Query: 244 IYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
+YP +KR A+IP L LAQ G +LP +++A + +L V + TFY MF P+
Sbjct: 4 LYP--NKRSALIPALHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPV 60
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
GK+ + VC C LRG+D L + + G + G+F+V ECL
Sbjct: 61 GKHVIHVCKNISCMLRGADGFLARLCQKMHISPGETTQDGEFTVIASECL 110
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/114 (34%), Positives = 61/114 (53%)
Frame = +1
Query: 235 LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIR 414
L I + H++G++I +L AQ G +LP S + +A L + +VY +ATFYT F
Sbjct: 26 LKIIEEKRHEKGSLIAILQQAQDIYG-YLPLSVLKCIARELGIKPAKVYGIATFYTQFRL 84
Query: 415 RPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+P GKY + C T C + GS+ + + + + G +P G FS+ CLG
Sbjct: 85 QPAGKYQIMFCQGTACHVNGSERIESTLCQELKIKRGETTPDGLFSLESAACLG 138
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 76.6 bits (180), Expect = 4e-13
Identities = 37/127 (29%), Positives = 69/127 (54%)
Frame = +1
Query: 196 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
FE +A ++ +E + Y + R A I L + Q+ G W+P A+H +A++L +P
Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
V VATFY+ R+P+G++ ++ C + C + G + A+++ + G + G+F++
Sbjct: 69 VEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTL 128
Query: 556 SEVECLG 576
CLG
Sbjct: 129 LPTCCLG 135
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 76.2 bits (179), Expect = 5e-13
Identities = 40/106 (37%), Positives = 60/106 (56%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
++ A+I +L AQ G +L T + +A L+LP RVY VATFY F P G++
Sbjct: 35 YRPDALIEVLHRAQELFG-YLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSC 93
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC T C++RG+ A+L A ++ G + G +P G+ S+ CLG
Sbjct: 94 VVCLGTACYVRGAAAILAAAEQMLGIKAGHTTPDGRLSLETARCLG 139
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 75.8 bits (178), Expect = 7e-13
Identities = 40/109 (36%), Positives = 62/109 (56%)
Frame = +1
Query: 250 PEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGK 429
P+G +R A++PLL Q G ++ + ++AE+ V V +FY+ + P G+
Sbjct: 22 PQG-RRSALMPLLREVQDAEG-FVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGR 79
Query: 430 YHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
YH+QVC+T C L GSDA+ + + G +P G+FSV +VECLG
Sbjct: 80 YHLQVCSTLMCALAGSDALWDELVTRLDVQPGEVTPDGRFSVQKVECLG 128
>UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium oremlandii OhILAs|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
oremlandii OhILAs
Length = 166
Score = 75.8 bits (178), Expect = 7e-13
Identities = 38/121 (31%), Positives = 66/121 (54%)
Frame = +1
Query: 214 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVAT 393
N ++A A+ GA+IP L Q G +LP A+ V+E L++P ++Y VA+
Sbjct: 15 NSTMLKAKEALQDIKGTEGALIPALHKIQSIYG-YLPEEALILVSEELDIPITQIYGVAS 73
Query: 394 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
FY++F P G++ + VC T C+++GS +L+ + + G + GKF++ C+
Sbjct: 74 FYSLFSLEPKGQHVISVCLGTACYVKGSQNILERLSSELNIQEGNTTEDGKFTLQATRCI 133
Query: 574 G 576
G
Sbjct: 134 G 134
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 75.8 bits (178), Expect = 7e-13
Identities = 40/107 (37%), Positives = 60/107 (56%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
GHK +IP+L Q G +LP A+ +VA + R +Y VATFY F +P G+ H
Sbjct: 14 GHK-SEIIPILQDIQDAYG-YLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKH 71
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ VCT T C + G++ VL A++ G E G + ++S+ V C+G
Sbjct: 72 IMVCTGTACHVSGAEQVLDALERHLGIEEGDVTDDMEYSLESVGCIG 118
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 220 KRVEAL-LAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATF 396
KR++ L AI +++ A+I +L AQ G +L + +A L LP RVY VATF
Sbjct: 15 KRLKMLDAAIKRHQYQQDALIEILHKAQELFG-YLENDLLLYIAHSLKLPPSRVYGVATF 73
Query: 397 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
Y +F P G + VCT T C+++GS A+L +++AT G + G+ S+ CLG
Sbjct: 74 YHLFSLAPQGVHSCVVCTGTACYVKGSSAILADLEKATRIHAGETTADGQLSLLTARCLG 133
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +1
Query: 211 PNQKRVEALLAIYPEGHKRGA-MIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEV 387
P+ R L A +G +I +L AQ G +LP VA L++P VY V
Sbjct: 12 PDDPRFAELDAFIQDGRSSADHLIAVLHKAQEIFG-FLPEEVQRHVAAALHVPPSEVYGV 70
Query: 388 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVE 567
TFY F P+GKY + VC T C+++G+ +L + G + G +P G FS+
Sbjct: 71 VTFYNYFTLTPVGKYPINVCMGTACYVQGAGRLLSLFERELGIQPGQVTPDGLFSLEVCR 130
Query: 568 CLG 576
CLG
Sbjct: 131 CLG 133
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/118 (31%), Positives = 65/118 (55%)
Frame = +1
Query: 223 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYT 402
++ +++ Y +G K A+ L DL + +LP A+ V++ L +P R+YE+ATFY
Sbjct: 22 KIREIISKY-DGEKSAAVAVLQDLQEEFR--YLPKEALTIVSDELQVPLSRIYEIATFYN 78
Query: 403 MFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+F +P GKY ++VC T C ++G ++ ++ G + F++ EV CLG
Sbjct: 79 VFSLKPRGKYLIEVCAGTACHVQGGFNLMNRLERNLNISCGETTEDAMFTLEEVRCLG 136
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +1
Query: 253 EGH---KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
+GH KR ++P L L + G+L A+ ++A + L + V V ++Y+M +PI
Sbjct: 15 QGHYPTKRSPLVPFL-LYVQDEVGYLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPI 73
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
GKY+VQVCT C RG + + + K+ G +P G FS+ EVEC+G
Sbjct: 74 GKYNVQVCTNICCLQRGGEDIFEHCKKTLGIGHKQTTPDGLFSLEEVECIG 124
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/106 (35%), Positives = 58/106 (54%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
H GA +P+L Q G++P A+ +AE LNL R VY V TFY F R G++ V
Sbjct: 33 HLEGATMPILHALQE-TFGFVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVV 91
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
++C C G A+ + ++E G ++G SP G+ ++ + CLG
Sbjct: 92 KLCAAEACQSVGGKALAQYVEEKLGVDMGSTSPDGRVTLEPIYCLG 137
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/104 (35%), Positives = 58/104 (55%)
Frame = +1
Query: 265 RGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 444
+G +I +L AQ G +LP +AE L +P V V TFY++F RP GKY + V
Sbjct: 49 KGQLIRILQKAQDIFG-YLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINV 107
Query: 445 CTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C T C+++G+ V+ A+K+ + G +P G F++ C+G
Sbjct: 108 CMGTACYVKGAQQVMDALKKRLKIDEGETTPDGLFTLKSTRCVG 151
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 74.1 bits (174), Expect = 2e-12
Identities = 31/106 (29%), Positives = 58/106 (54%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
H A I L++ QR +G W+ + ++AE+L + + +ATFY + RRP+G+ +
Sbjct: 20 HPSAAAIEALNIVQRSHG-WISDELLQEIAELLGMSPAELDSIATFYNLIYRRPVGRRVI 78
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C + CW+ G++ + + E G VG + G++++ + CLG
Sbjct: 79 HYCNSVSCWMLGAEDNRRHLSEKLGIAVGETTGNGEYTLLPIVCLG 124
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 73.3 bits (172), Expect = 4e-12
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
K+ A+I +L AQ G +LP + +++ L++P +VY V TFY F +P GK+ ++
Sbjct: 38 KKDALIQVLHKAQELFG-YLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIK 96
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC T C+++G+D + + E + G FSV V CLG
Sbjct: 97 VCLGTACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLG 141
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/121 (33%), Positives = 64/121 (52%)
Frame = +1
Query: 214 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVAT 393
+Q V+ L I G+ + A IP+L Q G +LP + +V E + + +Y VAT
Sbjct: 2 SQSNVKKYLEIC--GNTKEASIPILQSIQEEYG-YLPLDVLDQVCEESEITKSHLYGVAT 58
Query: 394 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
FY F P G+ ++VC T C ++G+D + A+K+ G ++ + G FS+ V CL
Sbjct: 59 FYAQFKLTPKGRNAIKVCKGTACHVKGADITIVAMKDQLGIDIDQTTEDGAFSMETVACL 118
Query: 574 G 576
G
Sbjct: 119 G 119
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 73.3 bits (172), Expect = 4e-12
Identities = 39/107 (36%), Positives = 59/107 (55%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
G + A+I L Q G +L + + VA +L +P RVY ATFY F +P G++
Sbjct: 28 GREPHALIETLHTVQECFG-YLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHT 86
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VCT T C+++G+ A+L AI++ G + G + G+ SV CLG
Sbjct: 87 CVVCTGTACYIKGAPALLGAIEKQYGIKPGETTADGELSVLTARCLG 133
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 73.3 bits (172), Expect = 4e-12
Identities = 43/128 (33%), Positives = 67/128 (52%)
Frame = +1
Query: 187 SIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLP 366
S P + A + + ++ YP+ +R A++PLL L Q + +L + + A+ L L
Sbjct: 31 SYPPDVLARLEVDAKEIIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLT 87
Query: 367 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGK 546
V VA+FYTM+ RRP G+Y V VCT T C + G DA+ +KE G + G
Sbjct: 88 GAEVSAVASFYTMYRRRPTGEYLVGVCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGV 147
Query: 547 FSVSEVEC 570
++ +EC
Sbjct: 148 VTLQHIEC 155
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 72.9 bits (171), Expect = 5e-12
Identities = 38/105 (36%), Positives = 54/105 (51%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
KR A+IP+L Q G+LP AM A + VY V+TFY F P+G++ V
Sbjct: 15 KRDALIPVLQDIQ-GEFGYLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPVGRHTVT 73
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC T C + G +L+ K G + G +P G F++ V C+G
Sbjct: 74 VCQGTACHVMGGHRILEECKSQLGVQPGQTTPDGMFTLETVACIG 118
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/111 (34%), Positives = 61/111 (54%)
Frame = +1
Query: 244 IYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
I P + ++I +L AQ G +LP +VAE L L +Y V TFY F P
Sbjct: 21 IEPYRGQPNSLIQVLAKAQEYIG-YLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPR 79
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
G++ + VC T C+++G+ VLK +++A G + G +P +F++ V C+G
Sbjct: 80 GRHKLSVCAGTACYVKGTKNVLKGVRDAIGIKPGQTTPDSRFTMEIVRCIG 130
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 72.1 bits (169), Expect = 9e-12
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = +1
Query: 226 VEALLAIYPEGHKRGAMIPLLDLA--QRXNGGWLPTSA------MHKVAEILNLPRMRVY 381
++ +A YP KR A++ L +A +R G P + + VA L + + Y
Sbjct: 10 IDREVAKYPADQKRSAVMGALRIALDERRAAGETPEARCLNPELIEFVANYLGIAPVAAY 69
Query: 382 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSE 561
EVATFY M+ +P+GK+ + VCT PC L G + I + G +G S G +++ E
Sbjct: 70 EVATFYNMYDMKPVGKFKITVCTNLPCALSGGVNAAEYISKKLGIAIGETSADGMYTLLE 129
Query: 562 VECLG 576
EC+G
Sbjct: 130 GECMG 134
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 72.1 bits (169), Expect = 9e-12
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = +1
Query: 316 WLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKA 495
++P A+ A++ ++P + Y VATFY+ P GK +++C + PC + G+D V+ A
Sbjct: 31 YIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRICESAPCHIAGADKVVAA 90
Query: 496 IKEATGCEVGGNSPCGKFSVSEVECLG 576
+++ G ++G +P GKF++ EC+G
Sbjct: 91 LEKELGIKMGETTPDGKFTLEFAECVG 117
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/124 (29%), Positives = 68/124 (54%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYE 384
TA +E + YP + R A + L QR NG W+ + M+ +A++L++ +
Sbjct: 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNG-WVDDAQMNAIAQMLSISVADLEG 75
Query: 385 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEV 564
VATFY R+P+G++ + +C + C+L G++ + +A + G + G + G+F++ +
Sbjct: 76 VATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPI 135
Query: 565 ECLG 576
CLG
Sbjct: 136 CCLG 139
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/126 (30%), Positives = 67/126 (53%)
Frame = +1
Query: 199 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRV 378
EFT V+ L+ Y H G +IPLL+ Q G +LP S ++E ++ R+
Sbjct: 6 EFTKEQIDEVDGLIDRYG-AHPSG-LIPLLEKVQELLG-YLPLSIQEYISEKTHISPNRI 62
Query: 379 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVS 558
Y V TFY+ F ++ VQ+C T C+++G+DA+++ I+ G ++ G+F+
Sbjct: 63 YGVVTFYSFFTMEARARHRVQLCLGTACYVKGADAMVEKIENDYQINFGESTEDGRFTFE 122
Query: 559 EVECLG 576
+ C+G
Sbjct: 123 KARCVG 128
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/111 (29%), Positives = 63/111 (56%)
Frame = +1
Query: 244 IYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
I G R +++P L+ Q G++P A++ + E L++P + +Y + TFY++
Sbjct: 13 ITQSGSSRLSLLPCLEAVQE-ECGYIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQK 71
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
GKY +++C + PC+L G++ +L + + G E G + +F++ V CLG
Sbjct: 72 GKYVIRLCNSLPCYLNGTENILDTLVDNLGIEPGQTTLDRRFTLELVPCLG 122
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/105 (35%), Positives = 57/105 (54%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
K G ++ +L AQ G +LP VA+ + + +VY V +FYT F P GK+ +
Sbjct: 39 KEGHLVTVLHKAQSLFG-YLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPIS 97
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC T C+++G+D V+ A K G V + GKFS+ + C+G
Sbjct: 98 VCMGTACFVKGADKVVDAFKNQLGVTVSEVTRDGKFSIDCLRCVG 142
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/106 (33%), Positives = 59/106 (55%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
H RG++IP+L Q G +LP + V+E LN+ + VATFY F RP G++ +
Sbjct: 28 HGRGSLIPILQTIQTAYG-YLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHII 86
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ C+ T C ++G+ +++ + + VG + F++ EV CLG
Sbjct: 87 KACSGTACHVKGAKQIIEKLGKKLDIPVGETTKDTMFTLEEVACLG 132
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/122 (31%), Positives = 64/122 (52%)
Frame = +1
Query: 211 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVA 390
P K +L++Y K+ +IP+L LA + N +L M KVA + +P VY +A
Sbjct: 4 PVNKTYTPVLSLYEA--KKENLIPIL-LAFQRNFSYLSRDMMQKVAAYVGVPESSVYNIA 60
Query: 391 TFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVEC 570
TFY+ F P G + V VC T C + G++ +L+ I++ G + G + + S+ + C
Sbjct: 61 TFYSQFRLEPPGIHRVHVCRGTACHVMGAERLLRNIEKRLGIKAGETTLDNEISLDTINC 120
Query: 571 LG 576
G
Sbjct: 121 AG 122
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +1
Query: 313 GWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLK 492
G++ AM + A IL + + + E+ATFY R P+G+Y + VC + CW+ G ++
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCDSAVCWMEGYQRIID 95
Query: 493 AIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ + VGG SP G F++ V C+G
Sbjct: 96 YLCQRLKLTVGGTSPDGLFTLLPVCCIG 123
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 68.9 bits (161), Expect = 8e-11
Identities = 33/107 (30%), Positives = 55/107 (51%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
G + AM+ L L Q G W+ + + + A++L + + +ATFY+ R P+G
Sbjct: 19 GGAKAAMVEALKLVQEAEG-WVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTV 77
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ +C C+L G DAV A+ G G +P GKF++ + C+G
Sbjct: 78 ILLCDGLSCYLCGGDAVRDAVMSKLGIGFGETTPDGKFTLINICCVG 124
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/101 (34%), Positives = 58/101 (57%)
Frame = +1
Query: 274 MIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTT 453
+IP+L Q G +LP +AM +V+ ++P R+Y V TFY+ F + P GK+ V++C
Sbjct: 33 LIPILQEMQEEYG-YLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHTVRLCAG 91
Query: 454 TPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C ++G+ + + I + + G +P KF+ V CLG
Sbjct: 92 TACHIKGAPDIGEKIADVLQVKEGETTPDYKFTHKTVACLG 132
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/87 (35%), Positives = 52/87 (59%)
Frame = +1
Query: 316 WLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKA 495
+LP SA+ AE + +P +VY +ATFY F +P G+++++VC T C ++GS+ +L
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKVCDGTTCHIKGSNILLDE 99
Query: 496 IKEATGCEVGGNSPCGKFSVSEVECLG 576
I + G G + +FS+ V C+G
Sbjct: 100 IHKNLGIGPGETTADREFSLETVNCIG 126
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/119 (29%), Positives = 62/119 (52%)
Frame = +1
Query: 217 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATF 396
+++ L A YP+ ++P L + + A+ +A L LP M+V E T+
Sbjct: 5 EEKFAQLRATYPKELNSSLVMPFLRIMLDEKKSLGESDAVF-IANYLGLPAMQVKEALTW 63
Query: 397 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECL 573
YTMF R P+G + ++VC C L G++ ++ + + G + G + G+F++ VECL
Sbjct: 64 YTMFYRHPVGTHVIKVCRNIACSLMGAERIIDHLSQKLGIKPGETTADGRFTLLLVECL 122
>UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative; n=2; Sphingobacteriales genera
incertae sedis|Rep: NADH-ubiquinone oxidoreductase 24
kDa subunit, putative - Salinibacter ruber (strain DSM
13855)
Length = 249
Score = 67.3 bits (157), Expect = 2e-10
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Frame = +1
Query: 166 DTPEDNPSIPFE-----FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTS 330
+ P+ +P F +T + ++EA YPE + A++ +L LAQ G+L
Sbjct: 36 ELPDQDPDPAFSDDELVWTDEEEAQIEAWKDQYPED--QAAIMKVLWLAQE-KFGYLAPE 92
Query: 331 AMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEAT 510
+ A+ L++ + Y VATFY + + G Y + VCT C + G VL ++E
Sbjct: 93 VIQLCADTLDMTFTQAYGVATFYHQYFKEEKGTYVLDVCTCFTCQVCGGYDVLHYLEEKL 152
Query: 511 GCEVGGNSPCGKFSVSEVECLG 576
G G + G F++ E ECLG
Sbjct: 153 GVHAGETTDDGMFTIQEAECLG 174
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 67.3 bits (157), Expect = 2e-10
Identities = 39/124 (31%), Positives = 63/124 (50%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYE 384
T P + VE A+ G++ G +I L Q+ + G++ AM ++A L LP +VY
Sbjct: 16 TEPRWRPVET--AMRRNGYQAGGLIEALHAVQQ-SYGYIDEEAMGRLATALTLPLSKVYG 72
Query: 385 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEV 564
V TFY F +P G++ VC T C+++G+ +L I A + G + G S+
Sbjct: 73 VVTFYHFFHLKPKGRHSCVVCLGTACYIKGAAEILGDIAAAYHIKAGETTADGALSLLTA 132
Query: 565 ECLG 576
C+G
Sbjct: 133 RCVG 136
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 66.9 bits (156), Expect = 3e-10
Identities = 41/124 (33%), Positives = 67/124 (54%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYE 384
T + +E +A YPE KR I L Q G++ +++ V+E+ +L ++ E
Sbjct: 3 TDQERAHLEEHIAHYPE--KRAGAIYCLYFMQ-DKYGYITKPSLNLVSELTDLSTTQLDE 59
Query: 385 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEV 564
+ TFYT+ RRP+G+ ++VC + C RG+ VL+A + ATG +G + G +V
Sbjct: 60 LITFYTLLRRRPVGRNIMRVCDSISCHTRGAKKVLEAAENATGKALGEIANDGSITVLPS 119
Query: 565 ECLG 576
CLG
Sbjct: 120 ICLG 123
>UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 163
Score = 66.9 bits (156), Expect = 3e-10
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +1
Query: 265 RGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 444
R ++P L + QR G ++ + + + L + M E FY+MF ++ GK+ ++
Sbjct: 24 RALVLPSLWMVQRAQG-FIDAKDVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKF 82
Query: 445 CTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C T C LRGSD ++K ++ G ++G S G FS+ E ECLG
Sbjct: 83 CKTITCKLRGSDELIKFTQDILGIKMGETSSDGLFSLGETECLG 126
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/105 (32%), Positives = 58/105 (55%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
K+G +IP+L Q G ++P A K+ E + L +Y VATFY F P+GK+ ++
Sbjct: 33 KKGNLIPVLQGVQSIFG-YVPREAFIKLNEEMGLQLSDMYGVATFYAQFRLNPVGKHIIK 91
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC T C ++ + + +A+++ G + G + F++ V CLG
Sbjct: 92 VCHGTACHVQSATKITEALEKELGVKDGHTTEDNLFTLESVACLG 136
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/98 (34%), Positives = 54/98 (55%)
Frame = +1
Query: 283 LLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 462
+L+L LP + VAE L++P +VY V TFY+MF P G+Y V+VC + PC
Sbjct: 29 MLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYSVITFYSMFGTEPRGRYLVEVCKSGPC 88
Query: 463 WLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ G+ VL+ ++E G + G + F++ + C G
Sbjct: 89 HVSGAKNVLQLLEEKLGIKPGQTTQDRVFTLIQSSCFG 126
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 66.1 bits (154), Expect = 6e-10
Identities = 34/134 (25%), Positives = 70/134 (52%)
Frame = +1
Query: 175 EDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEI 354
E + I +F Q+++E I R ++I +L Q+ + GW+ + ++A I
Sbjct: 8 EMSKKIDIKFKLTIQEKIEIFNIIKNYRTVRSSLIEILKFVQK-SYGWISNELITELACI 66
Query: 355 LNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNS 534
L + + + E+ATFY+ R+PIG+ ++ C + C++ G + + ++++ VG +
Sbjct: 67 LKISKCDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCEKIRCSLEKNLNVNVGETT 126
Query: 535 PCGKFSVSEVECLG 576
KF++ + CLG
Sbjct: 127 KDFKFTLLPICCLG 140
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 65.7 bits (153), Expect = 7e-10
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKRGAM-IPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVY 381
+A +Q+ ++A+ A R A+ I L + Q G W+ ++ +A L++ +
Sbjct: 11 SALSQEELQAIDAEIAHVPYRDAVAIDALKIVQAHRG-WVSDESLSAIAAHLHMSADELD 69
Query: 382 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSE 561
+ATFY + RRP+G + +C + CW++G D + + I E G E+G + ++++
Sbjct: 70 GIATFYNLIYRRPVGDKVILLCNSISCWIKGCDNLQQRITEELGVELGETTSDNRYTLLP 129
Query: 562 VECLG 576
V CLG
Sbjct: 130 VTCLG 134
>UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4;
Bacteria|Rep: NAD-reducing hydrogenase, putative -
Geobacter sulfurreducens
Length = 191
Score = 65.3 bits (152), Expect = 1e-09
Identities = 41/122 (33%), Positives = 61/122 (50%)
Frame = +1
Query: 211 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVA 390
P K VE L Y ++ A++ +L +AQ G L M VA L +P RVY VA
Sbjct: 20 PRFKVVERTLKQYQ--YRADALLEVLHVAQE-TFGCLSDELMTHVARQLRVPPSRVYGVA 76
Query: 391 TFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVEC 570
TFY F G++ VCT T C+++ S ++ ++ + G + GK ++S V C
Sbjct: 77 TFYHFFTLEARGEHSCVVCTGTACYVKRSAEIVTRLENEFDVKAGKTTADGKLTLSTVRC 136
Query: 571 LG 576
LG
Sbjct: 137 LG 138
>UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Synechococcus sp. WH 5701|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Synechococcus sp. WH 5701
Length = 168
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/102 (36%), Positives = 57/102 (55%)
Frame = +1
Query: 271 AMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 450
A+I +L AQ+ +L + VA L LP RV A+FY +F +P ++ VCT
Sbjct: 36 ALIEVLHGAQKLYS-YLSDDLLRHVATRLQLPLSRVKGTASFYHLFRFQPPARHRCVVCT 94
Query: 451 TTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C ++G+ A++ A++E G ++G G S+SEV CLG
Sbjct: 95 GTACQIQGAPALIAAMEEGLGLKLGARRGDGWASLSEVRCLG 136
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
G A +PLL Q G +LP AM + ++ ++Y VATFY+ F P+G++
Sbjct: 23 GKSVSAAVPLLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHV 81
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGC--EVGGNSPCGKFSVSEVECLG 576
++VC T C + G+D + A++++ G E + G ++V +V C+G
Sbjct: 82 IKVCHGTACHVSGADRINTALRQSLGIKNEDEDTASNGSYTVEDVACIG 130
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 244 IYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
I G + +IP+L Q+ +LP + +A +++L VY VATFY F P
Sbjct: 18 IEKHGKDQSKLIPILQEVQKEYR-YLPEEILTYIATVMDLSPATVYGVATFYAQFSLDPK 76
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGG-NSPCGKFSVSEVECLG 576
GKY + VC T C + GS VL AI++ E G + F+V V CLG
Sbjct: 77 GKYVINVCDGTACHVSGSLPVLNAIRKKLNLEDGKFTTDDLMFTVETVSCLG 128
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/114 (29%), Positives = 58/114 (50%)
Frame = +1
Query: 235 LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIR 414
+L YP+ +R + L D+ + ++P +M +A+ L LP ++Y +ATFY
Sbjct: 15 ILEGYPK-EQRYTLAMLQDIQKEFQ--FIPRESMELIADYLELPLSKIYSLATFYKALSL 71
Query: 415 RPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
RP GK+ +++C T C +R S + + G + G+FS+ V CLG
Sbjct: 72 RPKGKHVIKICDGTACHIRSSQMLANELYTLLKIRPGETTEDGQFSIEMVNCLG 125
>UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Sphingomonadaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Sphingomonas wittichii
RW1
Length = 159
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Frame = +1
Query: 205 TAPNQKRVEALLA--IYPEGHKRGAMIPLL-DLAQRXNGGWLPTSAMHKVAEILNLPRMR 375
T ++ VEA++A + +G +RGA++PLL DL + G++ + VA +NL R
Sbjct: 2 TMERREPVEAMVARLLAAQGERRGALLPLLHDLQEEL--GFVGEETVAAVAAAMNLSRAE 59
Query: 376 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSV 555
V+ V +FY F + P G++ V+ C C RG A+ A+ + +G G+ ++
Sbjct: 60 VHGVVSFYHDFRKAPAGRHVVKYCRAESCRSRGGVAIEAALADRLRVTMGETRADGQVTL 119
Query: 556 SEVECLG 576
V CLG
Sbjct: 120 EPVYCLG 126
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
G ++P+L Q G +P +A+ +A+ LNL R V+ V TFY F RP G++ +++C
Sbjct: 26 GPLLPILHEIQ-DEFGHVPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRHVLKLC 84
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C GSDAV IK+ G + G ++ V CLG
Sbjct: 85 QAEACQSMGSDAVAAKIKQLLGIGFHETTRDGSVTLEPVYCLG 127
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/101 (32%), Positives = 49/101 (48%)
Frame = +1
Query: 274 MIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTT 453
M L DL L ++ VAE +NLP+ V FYTMF RP K+ ++VC +
Sbjct: 52 MAILRDLENLSGNQQLSPETLNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAKFLIRVCKS 111
Query: 454 TPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
PC + G+ + +++ G G + G F + ECLG
Sbjct: 112 GPCHVMGARTIFDYVEKHLGISPGQTTADGLFHLEACECLG 152
>UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor - Victivallis vadensis ATCC BAA-548
Length = 150
Score = 62.5 bits (145), Expect = 7e-09
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = +1
Query: 313 GWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLK 492
G++ ++ ++E +P + V V +FY F R GKY + +C T C ++GS V +
Sbjct: 30 GYVSDESIRAISEYFGIPEVEVEGVLSFYAQFKRVKPGKYKIAICDGTACHIKGSPLVQE 89
Query: 493 AIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ A G E G G FS+ V CLG
Sbjct: 90 WVSRALGIEDGQTDERGHFSLETVACLG 117
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 62.5 bits (145), Expect = 7e-09
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHK--RGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRV 378
T + V L+ H+ RG ++P+L Q G +P A+ +AE LNL R V
Sbjct: 4 TTTGETSVATLVREIAADHRDHRGPLLPILHAVQERLG-CVPAEAVPVLAEELNLSRADV 62
Query: 379 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVS 558
+ V TFY F P G+ V+VC C G+ ++ +++ G ++G + G +
Sbjct: 63 HGVITFYHDFRSEPAGRTTVRVCRAEACQALGASRLVAHLQDRHGVQLGDATDDGTLTAE 122
Query: 559 EVECLG 576
+V CLG
Sbjct: 123 QVFCLG 128
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/88 (32%), Positives = 51/88 (57%)
Frame = +1
Query: 313 GWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLK 492
G++ + ++A+ ++P+ R+Y V +FY+MF P GKY V+VC + C L S +++
Sbjct: 36 GFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRVCDSVSCRLNESADLVR 95
Query: 493 AIKEATGCEVGGNSPCGKFSVSEVECLG 576
A+K+ E + KF++ ECLG
Sbjct: 96 ALKDYLKVEENETTKDKKFTLEVAECLG 123
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 214 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVAT 393
++KR++ ++ YP + G + +L Q +P + V+E L+LP ++ + T
Sbjct: 2 DEKRLDEIIEKYP--YPAGRTLGVLREIQ-IQERHIPMDTLKLVSEKLDLPLSELFALVT 58
Query: 394 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGC--EVGG-----NSPCGKFS 552
FY+ F +P+G++ + VC TPC ++G++ +L+ ++E G EV +P KF+
Sbjct: 59 FYSFFSLKPVGEHLITVCMGTPCHVKGAEKILETLEEHLGLSGEVQDGKYLQTTPDNKFT 118
Query: 553 VSEVECLG 576
V C G
Sbjct: 119 VEIARCFG 126
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/102 (27%), Positives = 52/102 (50%)
Frame = +1
Query: 271 AMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 450
A++PLL ++ + + +++++ L + + TFY F+ P GK V+VC
Sbjct: 29 AVLPLLHYYMEKKN-YISEADVSRISQLTGLSVSDILGIGTFYQHFVFHPTGKNSVRVCL 87
Query: 451 TTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
TTPC RG + + ++ G + +P G F++ +CLG
Sbjct: 88 TTPCLFRGGKKTFETLSKSLGIGLEETTPDGLFTLYPAQCLG 129
>UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Pseudomonas|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Pseudomonas putida W619
Length = 160
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/103 (32%), Positives = 54/103 (52%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
GA++P+L Q + G++P +A+ +A LNL V V +FY F P ++ +++C
Sbjct: 23 GALLPILHAVQE-SIGFIPDAAVADIAHALNLSLAEVRGVISFYHDFRTAPPARHTLRLC 81
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C RGS+A+ ++E + G S G S+ V CLG
Sbjct: 82 RAESCQSRGSEALAAQLREQLALDDHGTSADGAISLRPVYCLG 124
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/111 (28%), Positives = 55/111 (49%)
Frame = +1
Query: 244 IYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 423
I + GA + +L Q G ++P +A+ VA+ LNL R V+ V TFY F +P
Sbjct: 21 IAEHARQEGATLVILHALQAAFG-YVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPA 79
Query: 424 GKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
G++ +++C C G DA+ + G +G + + ++ + CLG
Sbjct: 80 GRHVLKLCRAEACQAAGGDALAARAEARLGVSLGNTTADDRVTLEPIYCLG 130
>UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n=3;
Proteobacteria|Rep: Formate dehydrogenase, gamma subunit
- Methylococcus capsulatus
Length = 159
Score = 58.8 bits (136), Expect = 9e-08
Identities = 32/103 (31%), Positives = 53/103 (51%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
GA++P+L Q G++P A+ ++A+ LNL R V+ V +FY F GK+ + +C
Sbjct: 23 GALLPILHGIQ-DRIGFIPEDAVPQIAKALNLSRAEVHGVISFYHYFRTTAPGKHTIHLC 81
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C S+++ +K G + + G FS+ V CLG
Sbjct: 82 RAESCQAMNSESLETHVKARLGIDYHETTADGAFSLEPVYCLG 124
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 58.8 bits (136), Expect = 9e-08
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 193 PFEFTAP-NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPR 369
P F P N + +A+LA YP + A++PLLDLAQR +G W+P +AM+++A + +
Sbjct: 3 PIRFFKPENLQLAKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSI 62
Query: 370 MRVYEVATFY-TMFIRRPIGKYHVQVCTTTPC 462
V+ + Y F RP K V++C + C
Sbjct: 63 DYVHSLILAYPNDFFWRP-KKPRVRICNSWMC 93
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/103 (29%), Positives = 55/103 (53%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
G ++P+L Q G++P + VAE LN+ +++ V TFY F +P G++ ++VC
Sbjct: 36 GNLMPVLQGIQ-DEYGYVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRVC 94
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
T C ++G+ ++ E G +P +++ +V CLG
Sbjct: 95 VGTACHVQGAPRIVDTFFEKLGIGHAETTPDLRYTFEKVACLG 137
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/124 (25%), Positives = 61/124 (49%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYE 384
++ Q+ ++ L++ P+ G I L L Q G W+ +++H ++ +P +
Sbjct: 22 SSKEQQGIDELISHSPQ--LAGITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDS 78
Query: 385 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEV 564
VATFY + R+P+GK + C C L G + + + +K+ G + +F++ +
Sbjct: 79 VATFYNLIFRQPVGKVVLHPCDGISCDLMGGEHIRQCLKQQLNITAGETTTDNRFTLIPL 138
Query: 565 ECLG 576
CLG
Sbjct: 139 PCLG 142
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +1
Query: 283 LLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 462
L++L G++ VAE L+L RVYE+ +FY + P KY +++C +TPC
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTPC 86
Query: 463 WLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
G V + ++ +P G F + C+G
Sbjct: 87 HYTGGAMVAEVLETILEVPENQPTPDGLFMYHSIPCIG 124
>UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobacter
sp. ELB17|Rep: ATP synthase subunit E - Marinobacter sp.
ELB17
Length = 178
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/106 (30%), Positives = 53/106 (50%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
HK GA++P+L Q G++P A+ +AE+L R ++ V +FY F P G +
Sbjct: 36 HKPGALLPILHAIQ-DRVGYVPEDAVPIIAEMLQQTRADIHGVISFYHHFRTHPSGSNLL 94
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+VC C RG A+ + ++E + +F++ V CLG
Sbjct: 95 EVCRAEACQARGGRALERHVQERLSVGYHDTTADNEFTLVPVYCLG 140
>UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 163
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Frame = +1
Query: 205 TAPNQKRVEALLAIYPEGHKR--GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRV 378
TA N K ++ + I E H+ GAM+P+L Q + ++P++A+ +A+ LN+ + V
Sbjct: 2 TATNDKGLQQIATII-EQHQTLPGAMLPILHAIQN-DLSFIPSNALPLIAKALNVSKAEV 59
Query: 379 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVS 558
+ V +FY F G + +++C C GS A+ + IK+ + S ++++
Sbjct: 60 HGVISFYHHFRTEEPGAHVIEICRGESCQAMGSRALEENIKQNLSIDYHQTSKDRQYTLE 119
Query: 559 EVECLG 576
V CLG
Sbjct: 120 PVYCLG 125
>UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 168
Score = 56.0 bits (129), Expect = 6e-07
Identities = 32/103 (31%), Positives = 51/103 (49%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
GA++P+L Q + ++P A+ VA+ L +Y V TFY F G++ +++C
Sbjct: 26 GALLPILHDIQH-HFDYIPKKAIAIVAQGLQQTEAEIYGVITFYAHFQLNKPGRHIIEIC 84
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C GS A+ KAIK + G + F++ V CLG
Sbjct: 85 RGEACQAMGSKALEKAIKSQLAVDFGQTTVDKNFTLEPVYCLG 127
>UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=1; Jannaschia sp. CCS1|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Jannaschia
sp. (strain CCS1)
Length = 167
Score = 55.6 bits (128), Expect = 8e-07
Identities = 34/122 (27%), Positives = 56/122 (45%)
Frame = +1
Query: 211 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVA 390
P+ VE I G ++P+L Q G ++P A +A LN+ ++ V
Sbjct: 10 PDDLLVEVDAIIQKNIALEGPLLPILHDVQAAFG-YVPDDARALIATALNITEAELHGVI 68
Query: 391 TFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVEC 570
+FY F R+P GK +++C C G++A+ A+ G G + G +V + C
Sbjct: 69 SFYHDFRRKPAGKRVLKICRAEACQAMGANAMSDAVLAQLGLGWGETAADGGLTVEPIYC 128
Query: 571 LG 576
LG
Sbjct: 129 LG 130
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 55.6 bits (128), Expect = 8e-07
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
+ +IP+L Q +L + VA + +P RVY VATFY F +P GKY +
Sbjct: 27 YSESKLIPILQEVQAVYK-YLSKDMISYVATSIGVPPSRVYGVATFYAHFSMQPKGKYII 85
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGN---SPCGKFSVSEVECLG 576
++C T C ++ S +L A+ E ++ G+ S F++ V CLG
Sbjct: 86 KLCDGTACHVKKSHGILNALYEK--LKLSGDKRTSDDQLFTIETVSCLG 132
>UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1;
Methylophilales bacterium HTCC2181|Rep: ATP synthase
subunit E - Methylophilales bacterium HTCC2181
Length = 157
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
K GA++PL+ Q + G++P + ++ NL ++ TFY F P GK +Q
Sbjct: 21 KPGALLPLMHAIQ-DSLGYIPEDSYPIISSAYNLSIAEIHGFVTFYHHFRTSPSGKNILQ 79
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC C GS+++ K+ G + S G ++ V CLG
Sbjct: 80 VCRAESCQSMGSESIENYCKKVLGVDYHETSKDGVITLEPVYCLG 124
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 GHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 435
G A+I +L Q ++P +++ L + R++ VATFY F P GKY
Sbjct: 22 GTSETAIIAILQSIQEEYH-YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYI 80
Query: 436 VQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCG---KFSVSEVECLG 576
++VC T C +R S +++ +++ G + G P F+V V CLG
Sbjct: 81 IKVCDGTACHVRKSIPIIERLRKELG--LSGTKPTTDDLMFTVETVSCLG 128
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 316 WLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKA 495
+LP + V E L++P +V+ V +FY F P GKY +++C T C + S +L+A
Sbjct: 45 YLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRLCDGTACHAKRSIPILEA 104
Query: 496 IKEATGCEVGG-NSPCGKFSVSEVECLG 576
+ G +P F+V V CLG
Sbjct: 105 LYAKLGLSSKKVTTPDMLFTVETVTCLG 132
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 52.4 bits (120), Expect = 7e-06
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
+R ++P L A GW+ A+ V L +P Y VATFY MF RP +
Sbjct: 34 RRDQLLPALH-ALNDRVGWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRPRPATVLH 92
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVG---GNSPC 540
VCT C G+ + A++ G E G SPC
Sbjct: 93 VCTDLACTAAGASRLCAAVESRLGPESGVKLERSPC 128
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Frame = +1
Query: 268 GAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 447
G ++P+L Q G ++P S++ + + LN+ R V+ V TFY F +P G++ ++VC
Sbjct: 43 GPLLPILHEVQHQLG-YVPDSSLPIIGKALNISRAEVHGVVTFYHHFSSKPRGRHIIEVC 101
Query: 448 TTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C G + K A G + + + ++ V CLG
Sbjct: 102 RAESCQSMGGRDLEAHAKSALGLDWYQTTMDKEITLEPVFCLG 144
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/106 (22%), Positives = 52/106 (49%)
Frame = +1
Query: 259 HKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 438
+ + A I L + Q W+ ++ +++IL++P V +ATFY R+P+G+ +
Sbjct: 21 NSQAACIEALKIVQEHRK-WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGRNII 79
Query: 439 QVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
+ C + C++ ++ K +K G + ++++ CLG
Sbjct: 80 RYCDSVVCFINNFKSIKKKLKYILNISPGETTSDCRYTLLPTCCLG 125
>UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Pseudomonas mendocina ymp|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Pseudomonas
mendocina ymp
Length = 164
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Frame = +1
Query: 190 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLL-DLAQRXNGGWLPTSAMHKVAEILNLP 366
+P F AP Q + + GA++P+L D+ R G +P + +AE L L
Sbjct: 4 LPQRF-APEQCEAVTREVLAAHRGQPGALLPILHDIQDRL--GAVPPELLPLIAEDLCLS 60
Query: 367 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGK 546
R V+ V +FY F P G+ +++C C G A+ ++ G +G G
Sbjct: 61 RAEVHGVVSFYHDFRATPPGRQVLKLCQAEACQSMGVKALTAELESKLGLPLGETREDGS 120
Query: 547 FSVSEVECLG 576
S V CLG
Sbjct: 121 LSFEPVYCLG 130
>UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=28; Burkholderia|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 171
Score = 50.4 bits (115), Expect = 3e-05
Identities = 29/123 (23%), Positives = 60/123 (48%)
Frame = +1
Query: 208 APNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEV 387
+P+ +AL+ + + + +++ +L Q + G++P + + +A+ LNL R V+ V
Sbjct: 16 SPHSVAPDALVRAHAQPGR--SLVAILHAIQ-DDAGYVPPACVEPLAKALNLSRAEVHGV 72
Query: 388 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVE 567
T+Y F P +++C C G +A++ + GC + G + ++ V
Sbjct: 73 LTYYHHFRTAPPAHVTIRLCRAEACRSMGGEALVAHAQARAGCRIDGGHG-DRVALESVY 131
Query: 568 CLG 576
CLG
Sbjct: 132 CLG 134
>UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Maricaulis maris MCS10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Maricaulis
maris (strain MCS10)
Length = 163
Score = 49.2 bits (112), Expect = 7e-05
Identities = 31/102 (30%), Positives = 52/102 (50%)
Frame = +1
Query: 271 AMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 450
A+I +L Q + G + +A+ +A+ LNL R V V +FY F R+P ++ ++C
Sbjct: 26 ALIEVLHWLQA-SAGHISDAAIATIADALNLSRAEVLGVVSFYHDFRRQPGARHTFKLCR 84
Query: 451 TTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
C G++AV AI++ + P +F + V CLG
Sbjct: 85 AEACQAAGAEAVAAAIEDQLEALSTTDHP-PEFELKSVYCLG 125
>UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2;
Actinomycetales|Rep: NADH dehydrogenase - Arthrobacter
sp. (strain FB24)
Length = 566
Score = 49.2 bits (112), Expect = 7e-05
Identities = 28/78 (35%), Positives = 37/78 (47%)
Frame = +1
Query: 343 VAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEATGCEV 522
VA L LP V A+F+ F P G HV+VC+ C+ A + ++ A G
Sbjct: 53 VARTLGLPAAAVEGPASFFADF-SAPRGARHVRVCSAAACFAATGGAHVPEVEAALGVPS 111
Query: 523 GGNSPCGKFSVSEVECLG 576
G SP G S+ V CLG
Sbjct: 112 GSKSPDGTVSLQAVRCLG 129
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/87 (29%), Positives = 40/87 (45%)
Frame = +1
Query: 316 WLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKA 495
W+ A+ ++ L +PR ++ VA FY F P GKY V + GS A++
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRVLFSDNITDRMLGSKAMMDR 101
Query: 496 IKEATGCEVGGNSPCGKFSVSEVECLG 576
+ + E G S G SV++ C G
Sbjct: 102 LCNSLWVERGKVSEDGLVSVAQTACTG 128
>UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Gammaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Marinomonas
sp. MWYL1
Length = 165
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/105 (27%), Positives = 47/105 (44%)
Frame = +1
Query: 262 KRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 441
K GA++PLL Q ++P A+ +A L L R V+ V +FY F + G++ V+
Sbjct: 24 KPGALLPLLHAIQ-DRFSYIPEDAVALIAGALKLSRAEVHGVISFYHHFRTKQPGRHVVE 82
Query: 442 VCTTTPCWLRGSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
VC C G+ + K + + ++ V CLG
Sbjct: 83 VCRAEACQAVGARHLEAYAKSILDVQYHQTTADNNITLEPVYCLG 127
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +1
Query: 214 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVAT 393
NQ + + I PE +R +I L L Q L + + +A ++NLP ++EVA+
Sbjct: 25 NQAAINNVKTILPEILQRDMLIEYLHLIQ-DKVSHLSSDNLSALAFLMNLPLSEIWEVAS 83
Query: 394 FYTMFI-----RRPIGKYHVQVCTTTPCWLRGSDAVLKAI 498
FY F + P +++CT+ C L S+ +L+ I
Sbjct: 84 FYDHFTLVKDSQNPPPTRTIRICTSVTCSLFNSEKILETI 123
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 40.7 bits (91), Expect = 0.024
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Frame = +1
Query: 211 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVA 390
P R+ A A+ E + +I L Q +G L + +AE + L R V+EVA
Sbjct: 36 PASARLAASAALAGETPRADRLIEYLHRLQDEHGA-LHADHLAALAEAMKLARAEVFEVA 94
Query: 391 TFYTMFIRRPIG-----KYHVQVCTTTPCWLRGSDAVLKAIKEATGCEVG-GNSPC-GKF 549
TFY F P G V+VC + C + G + ++ G EV PC G+
Sbjct: 95 TFYHHFDFVPAGGKAPPALTVRVCESLGCAMAGGAELAASLASQLGAEVRVQRVPCVGRC 154
Query: 550 SVSEVECLG 576
+ V +G
Sbjct: 155 DSAPVAVVG 163
>UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02806 protein - Schistosoma
japonicum (Blood fluke)
Length = 82
Score = 38.7 bits (86), Expect = 0.098
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 472 GSDAVLKAIKEATGCEVGGNSPCGKFSVSEVECLG 576
GS+A+L +K+ G E G +P F+++EVECLG
Sbjct: 6 GSEAILNTLKKTLGIEPGQTTPDKMFTLTEVECLG 40
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 37.5 bits (83), Expect = 0.23
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +1
Query: 331 AMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEAT 510
A KVAE L + +V V FY+ P+GK+ +++ + + GS V +
Sbjct: 43 AQQKVAESLGVCITQVRAVVDFYSFLSTVPLGKFDIRISDSITDHMLGSREVAAGLCRKL 102
Query: 511 GCEVGGNSPCGKFSVSEVECLG 576
G + G G+ +S C G
Sbjct: 103 GIQPGEPRQDGRVGLSFTSCTG 124
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 35.5 bits (78), Expect = 0.91
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +1
Query: 226 VEALLAIYP-EGHKRGAMIPLLDLAQRXNGGWLPTSAMHKVAEILNLPRMRVYEVATFYT 402
V LL P +G++R +I L + G L + +A +NLP +VYEVA+FY
Sbjct: 45 VAQLLGPRPADGYRRDLLIEYLHRLN-DHFGVLHDRHLVALARQMNLPMAQVYEVASFYH 103
Query: 403 MF--IR---RPIGKYHVQVCTTTPCWLRGSDAVLKAI 498
F +R + V+VC + C + G+ +L+A+
Sbjct: 104 HFEIVRGHDAQAPRLVVRVCDSLSCTMAGARELLEAL 140
>UniRef50_A5H732 Cluster: Hypoxia-inducible factor 1 alpha; n=6;
Clupeocephala|Rep: Hypoxia-inducible factor 1 alpha -
Esox lucius (Northern pike)
Length = 763
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 566 STSETENFPQGLFPPTSQPVASLIAFKTASDPRSQHGVVVHT 441
STS+ P L PP+ QP+A L + T + P S V HT
Sbjct: 468 STSDKLALPLSLLPPSEQPLAPLCSVDTKAGPDSSSNPVSHT 509
>UniRef50_A7RRZ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 188
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 447 THLYMILSYWSPNKHSIECCNFIHSHSW*V*NFSYFVHGRSW 322
+H ++ LSY + H + + IHSH+W S+ +H + W
Sbjct: 141 SHHWVTLSYLIHSHHWVTLSHLIHSHNW--VTLSHLIHSQHW 180
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,123,491
Number of Sequences: 1657284
Number of extensions: 10993980
Number of successful extensions: 28591
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 27735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28548
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -