Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G11
         (578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.              208   1e-53
M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase...   207   2e-53
BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase (ubi...   207   2e-53
BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase (ubi...   207   2e-53
BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase (ubi...   207   2e-53
D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex...   205   1e-52

>CR456928-1|CAG33209.1|  249|Homo sapiens NDUFV2 protein.
          Length = 249

 Score =  208 bits (507), Expect = 1e-53
 Identities = 92/143 (64%), Positives = 118/143 (82%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++ 
Sbjct: 96  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG ++P   F++ EVECLG
Sbjct: 156 LGIKVGESTPDKLFTLIEVECLG 178


>M22538-1|AAA75390.1|  249|Homo sapiens NADH-ubiquinone reductase
           protein.
          Length = 249

 Score =  207 bits (506), Expect = 2e-53
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++ 
Sbjct: 96  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG  +P   F++ EVECLG
Sbjct: 156 LGIKVGETTPDKLFTLIEVECLG 178


>BC071689-1|AAH71689.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  207 bits (506), Expect = 2e-53
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++ 
Sbjct: 96  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG  +P   F++ EVECLG
Sbjct: 156 LGIKVGETTPDKLFTLIEVECLG 178


>BC017487-1|AAH17487.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  207 bits (506), Expect = 2e-53
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++ 
Sbjct: 96  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG  +P   F++ EVECLG
Sbjct: 156 LGIKVGETTPDKLFTLIEVECLG 178


>BC001632-1|AAH01632.1|  249|Homo sapiens NADH dehydrogenase
           (ubiquinone) flavoprotein 2, 24kDa protein.
          Length = 249

 Score =  207 bits (506), Expect = 2e-53
 Identities = 92/143 (64%), Positives = 117/143 (81%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 37  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD++L+AI++ 
Sbjct: 96  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKK 155

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG  +P   F++ EVECLG
Sbjct: 156 LGIKVGETTPDKLFTLIEVECLG 178


>D88548-1|BAA25988.1|  231|Homo sapiens 24-kDa subunit of complex I
           protein.
          Length = 231

 Score =  205 bits (500), Expect = 1e-52
 Identities = 91/143 (63%), Positives = 117/143 (81%)
 Frame = +1

Query: 148 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPT 327
           +LFVHRDTPE+NP  PF+FT  N KR+EA++  YPEGHK  A++P+LDLAQR NG WLP 
Sbjct: 19  ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 77

Query: 328 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAVLKAIKEA 507
           SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKY++QVCTTTPC LR SD++L+AI++ 
Sbjct: 78  SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYYIQVCTTTPCMLRNSDSILEAIQKK 137

Query: 508 TGCEVGGNSPCGKFSVSEVECLG 576
            G +VG  +P   F++ EVECLG
Sbjct: 138 LGIKVGETTPDKLFTLIEVECLG 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,886,142
Number of Sequences: 237096
Number of extensions: 1658201
Number of successful extensions: 3313
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3307
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)