Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G08
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.0  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   3.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   3.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   5.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 109 NPGHRTPSGPQK*LDP*NSPKSLCAG 32
           NPG+ +PSGP       NSP S  AG
Sbjct: 59  NPGNFSPSGP-------NSPGSFTAG 77


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 109 NPGHRTPSGPQK*LDP*NSPKSLCAG 32
           NPG+ +PSGP       NSP S  AG
Sbjct: 59  NPGNFSPSGP-------NSPGSFTAG 77


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 74   VTGPVEQPQVFVRG--LPVSRSE 12
            V G   QP+VFV G  + VSR++
Sbjct: 1520 VPGTTSQPEVFVNGEKIVVSRNK 1542


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 18   SADGKPAHKDLGLFYGSSYFCGPDGVRCP 104
            +AD KP  K    F       GP+G++ P
Sbjct: 1119 TADNKPQLKPQKPFTSPGGIPGPNGIKMP 1147


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 194 HVVTTTIFDLPVHIQIHNADQQSISGSRQS 105
           H++T  +F   V + I  +  +++S  RQS
Sbjct: 10  HLITVLLFSFVVILLIIPSKCEAVSNDRQS 39


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 167 LPVHIQIHNADQQS 126
           LP+ + ++N +QQS
Sbjct: 58  LPIDVDVYNTEQQS 71


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 348 QKCLQFYE*ISSFLCSENLYNIFF 277
           Q+C +F E ++ F  SE    +FF
Sbjct: 77  QQCGKFKEPVAVFYASEIAIGLFF 100


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 104 RAPDSIRSTEVTGPVEQPQVFVRGLPVS 21
           R    IRST+V    ++    V+G+P S
Sbjct: 523 RPRHEIRSTDVIPGTQEHVCGVKGIPCS 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,623
Number of Sequences: 438
Number of extensions: 2357
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)