Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G07
(581 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_14448| Best HMM Match : BACK (HMM E-Value=3.9e-10) 29 2.1
SB_14582| Best HMM Match : Gamma-thionin (HMM E-Value=1.1) 29 3.7
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.7
SB_31396| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5) 29 3.7
SB_18721| Best HMM Match : CUB (HMM E-Value=0) 29 3.7
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_4093| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00026) 28 4.8
SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32) 28 6.4
SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_16143| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00077) 27 8.5
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 106 WGQYICNISNVHGFRH*EF*CHVKRM 183
+G Y CN S+ + +H EF C++K++
Sbjct: 3935 FGSYSCNCSSAYSGKHCEFGCNIKKV 3960
>SB_14448| Best HMM Match : BACK (HMM E-Value=3.9e-10)
Length = 369
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 374 LEVTCNHEDTFWVDGKLYKYSDFHCNRKVLPVVIKTDNR 490
L ++C+ +VD K S CNRK+ +I D+R
Sbjct: 235 LSISCSQAVLIYVDDKQVGKSTTWCNRKITQFIIPEDSR 273
>SB_14582| Best HMM Match : Gamma-thionin (HMM E-Value=1.1)
Length = 364
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEAT 211
T + +Y V N TS+ + V R+ VTS C + RN E T
Sbjct: 186 TSIAARYFVKRNCEVTSIAALCFVERNCEVTSIAARCFVERNCEVT 231
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEAT 211
T + +Y V N TS+ V R+ VTS C + RN E T
Sbjct: 21 TSIAARYFVERNCEVTSIAARCFVERNCEVTSIAARCFVERNCEVT 66
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEAT 211
T + +Y V N TS+ + V R+ VTS C + RN + T
Sbjct: 126 TSIAARYFVERNCEVTSIAALCFVERNCEVTSIAARCFVERNCDVT 171
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEAT 211
T + +Y V N TS+ + V R+ VTS C + RN E T
Sbjct: 790 TSIAARYFVERNCEVTSIAALCFVERNCEVTSIAARCFVERNCEVT 835
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEAT 211
T + +Y V N TS+ + V R+ VTS C + RN E T
Sbjct: 850 TSIAARYFVERNCEVTSIAALCFVERNCEVTSIAARCFVERNCEVT 895
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTSKG--CLINRNSEATPYTPL 226
T + +Y V N TS+ V R+ VTS C + RN E T L
Sbjct: 715 TSIAARYFVERNCDVTSIAARCFVKRNCEVTSIAALCFVERNCEVTSIAAL 765
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 80 THLILKYLVGDNTFATSVTFMASVTRSFNVTS--KGCLINRNSEATPYTPL 226
T + +Y V N TS+ V R+ +VTS C + RN E T L
Sbjct: 700 TSIAARYFVERNCDVTSIAARYFVERNCDVTSIAARCFVKRNCEVTSIAAL 750
>SB_31396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 351 DSPKMNTNWRSLATTRTRSGSMGNCTSIQISTATGKFYRSS*RPITDASAI 503
DS + W + T G G ++++ TATGK+ RP+T + I
Sbjct: 621 DSNALRGKWSTGRVTEVYPGPDGKVRNVKVQTATGKYS----RPVTKIAVI 667
>SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5)
Length = 595
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 432 YLYSFPSTQNVSSWLQVTSSSYSSSGNLWKEL 337
+L S PSTQ V W + + + S W E+
Sbjct: 83 WLISTPSTQEVQMWTTLEAQGIAESSQAWHEI 114
>SB_18721| Best HMM Match : CUB (HMM E-Value=0)
Length = 288
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -3
Query: 432 YLYSFPSTQNVSSWLQVTSSSYSSSGNLWKELGVFSLLWQDNLKVVPGSTTINSFTVSNC 253
Y S+P N + +QVT+ S + +L S D L+V G ++ C
Sbjct: 189 YPDSYPLNVNCTYRIQVTAGQLVSLAIEFLDLAYSSACSDDALEVWDGPVGSSALIGRYC 248
Query: 252 G-KVEEWFRSNG 220
G + +W +SNG
Sbjct: 249 GYMIGQWVQSNG 260
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +2
Query: 185 LINRNSEATP----YTPLLLNHSSTLPQ 256
LIN + P YTP +LNH +TLPQ
Sbjct: 337 LINTYGQVVPIKHNYTPAVLNHVNTLPQ 364
>SB_4093| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00026)
Length = 220
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +2
Query: 317 HNRENTPNSFQRFPEDEYELEVTCNHEDTFWVDGKLYKYSDFHCNRKVL 463
HN+ NT PE YEL VT E V+ L YSD R VL
Sbjct: 157 HNK-NTKTVALTLPETGYELSVTWVREKRKNVNEMLKAYSDESAGRVVL 204
>SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32)
Length = 947
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 293 GTTFKLSCHNRENTPNSFQRFPEDEYELEVTCN 391
GT+F L N+EN N +F + Y L T N
Sbjct: 221 GTSFLLVVPNKENYTNGKHKFLDAAYSLNATSN 253
>SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 318 TIGKTPPTLSRDSPKMNTNWRSLAT 392
T G+ PP +D+PK ++W SL +
Sbjct: 171 TKGEKPPAKPKDAPKSTSDWPSLTS 195
>SB_16143| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00077)
Length = 170
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 317 HNRENTPNSFQRFPEDEYELEVTCNHEDTFWVDGKLYKYSDFHCNRKVL 463
HN+ NT PE YEL VT E V+ L YSD R V+
Sbjct: 110 HNK-NTKTVALTLPETGYELSVTWVREKRKNVNEMLKAYSDESAGRGVI 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,087,489
Number of Sequences: 59808
Number of extensions: 427754
Number of successful extensions: 2787
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2787
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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