Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G07
(581 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.18
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.95
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.95
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 3.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 3.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 5.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 8.9
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTYNGAQVD+
Sbjct: 179 WTYNGAQVDL 188
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 0.95
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +2
Query: 251 PQFETVNEFIVVEPGTTFKLSCHNRENTPNSFQRFPEDEYELEVTCNHEDT 403
P F + + V+ G T L C +TP + + EL + N+ T
Sbjct: 808 PYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVT 858
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.95
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +2
Query: 251 PQFETVNEFIVVEPGTTFKLSCHNRENTPNSFQRFPEDEYELEVTCNHEDT 403
P F + + V+ G T L C +TP + + EL + N+ T
Sbjct: 804 PYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVT 854
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 132 WTYDGNQVDL 141
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 200 WTYDGNQVDL 209
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 200 WTYDGNQVDL 209
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G QVD+
Sbjct: 170 WTYDGFQVDL 179
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 3.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G Q+D+
Sbjct: 166 WTYDGIQIDL 175
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 325 PIVAGQLESRARFYDDKFIYSF 260
P VA SRAR +DD + S+
Sbjct: 763 PHVAAYFLSRARHHDDLYSQSY 784
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 43 WTYNGAQVDI 72
WTY+G Q+D+
Sbjct: 169 WTYDGFQLDL 178
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,857
Number of Sequences: 438
Number of extensions: 3823
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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