Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G04
(451 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 120 4e-28
03_01_0034 + 318432-318825,318902-319851 120 4e-28
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 120 4e-28
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 120 4e-28
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 119 9e-28
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 119 9e-28
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 119 9e-28
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 117 5e-27
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 66 2e-11
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 66 2e-11
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 65 2e-11
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 64 5e-11
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 1.7
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 2.3
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 3.0
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 4.0
09_01_0092 - 1311892-1312055,1312490-1312574,1312628-1312936,131... 27 9.2
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 120 bits (290), Expect = 4e-28
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 549 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 605
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 120 bits (290), Expect = 4e-28
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 120 bits (290), Expect = 4e-28
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 390 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 120 bits (290), Expect = 4e-28
Identities = 53/57 (92%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 119 bits (287), Expect = 9e-28
Identities = 52/57 (91%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 119 bits (287), Expect = 9e-28
Identities = 52/57 (91%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 119 bits (287), Expect = 9e-28
Identities = 52/57 (91%), Positives = 57/57 (100%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 117 bits (281), Expect = 5e-27
Identities = 51/57 (89%), Positives = 56/57 (98%)
Frame = +1
Query: 1 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 171
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 385 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQY 441
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 65.7 bits (153), Expect = 2e-11
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 65.7 bits (153), Expect = 2e-11
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 461 NNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 65.3 bits (152), Expect = 2e-11
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 64.1 bits (149), Expect = 5e-11
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +1
Query: 4 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 168
NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 NSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 147 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRD-ALEQLLDS 13
+VH A LHLVHA++ V L E S EL D A+E L S
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTS 110
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 155 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 33
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -3
Query: 146 SFMLLSASVNSISSMPSPVYQCKKALRLNIAVN 48
S +L S N + S+P + +C+ + L+++ N
Sbjct: 261 SLKILDVSGNKLRSLPDSISKCRSLVELDVSYN 293
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 134 LSASVNSISSMPSPVYQCKKALRLNIAVN 48
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 155 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 33
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>09_01_0092 -
1311892-1312055,1312490-1312574,1312628-1312936,
1314155-1314229,1314363-1314438,1315594-1315679,
1315958-1316203,1316399-1316614
Length = 418
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 134 LSASVNSISSMPSPVYQCKKALRLNIAV 51
L+ S N+IS +P + C K RLN+ V
Sbjct: 207 LNESNNTISVLPDELAGCSKLFRLNLEV 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,884,830
Number of Sequences: 37544
Number of extensions: 126934
Number of successful extensions: 326
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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