Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G03
(525 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 54 1e-08
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 44 1e-05
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 43 2e-05
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 40 3e-04
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 40 3e-04
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 38 7e-04
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 33 0.020
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 33 0.020
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 31 0.11
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 27 2.3
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 25 5.2
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 25 5.2
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 25 6.9
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 54.0 bits (124), Expect = 1e-08
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQ 386
+P+P K E+LV+++A A+NP D PRI+G D +G + + +
Sbjct: 28 VPIPQPKNGELLVKIEAAAINPSDLMNATGGFPYTVYPRIVGRDYAGTVISGASHL---- 83
Query: 387 IGDEVFFTG----DISKNGSNAQYLALNEILAGPKPKSLTFEEAAAM 515
+G VF T +K+G++A+Y + E A P +L+F EAA++
Sbjct: 84 VGTRVFGTSGSELSFTKDGTHAEYCIIPEKAAVRMPSNLSFTEAASV 130
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 44.0 bits (99), Expect = 1e-05
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +3
Query: 210 PVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKV-RNFQ 386
P PT ++ E L V +A NPID K +S+E + + G D ++ GE V R+
Sbjct: 19 PKPTPEKGEFLGRVIRVAFNPIDWK-TLYNASIE-KGTVGGTDFVAVVEDVGEGVDRSKY 76
Query: 387 IGDEVFFTGDISKNGSNA---QYLALNEILAGPKPKSLTFEEAAAMPLT 524
IG V +GSNA +Y+ L+ L PK++T +AA +PLT
Sbjct: 77 IGATVSGWAPGPLDGSNAAWREYITLDVNLVYFVPKNITPSQAATLPLT 125
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 43.2 bits (97), Expect = 2e-05
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
Frame = +3
Query: 165 HLPITDTDSLLDLVLPVPT-VKEDEVLVEVKAIAVNPIDTKIRASTSSVETE-PRILGWD 338
H I+ D L VP + EVLV++KA ++N D I + + P + G D
Sbjct: 8 HDEISGFDQLKPEEYEVPQKLNPGEVLVKLKAASLNYRDLIITKGLYPLPLQLPVVPGSD 67
Query: 339 GSGIIAAKGEKVRNFQIGDEV---FFTGDI---------------SKNGSNAQYLALNEI 464
G+GII GE V F+ GD V FFT + +++G +Y L
Sbjct: 68 GAGIIEKVGEDVEGFEKGDSVVCNFFTNYLDGTPTDFATHSALGGTRDGCFQKYAVLPAH 127
Query: 465 LAGPKPKSLTFEEAAAMP 518
PK+L+FEE A +P
Sbjct: 128 ALVHAPKNLSFEEIATLP 145
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 39.5 bits (88), Expect = 3e-04
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +3
Query: 207 LPVPTVKED-EVLVEVKAIAV-NPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRN 380
+P PT+ +V+V+ A + + D+ I + + ILG + GI+A KG++V N
Sbjct: 53 VPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPGIEKGAILGHESCGIVAEKGDEVNN 112
Query: 381 FQIGDEVFFTGDIS 422
+IGD V D++
Sbjct: 113 LEIGDRVVIAFDLA 126
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 39.5 bits (88), Expect = 3e-04
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +3
Query: 177 TDTDSLLDLVLP-VPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGII 353
T S+L ++ +P + ++++ +N IDT +R + P I G + +G++
Sbjct: 11 TGPSSVLQVITKEIPKPAPNGLVIKNAYAGLNYIDTYLRTGLYTAPL-PYIPGKEAAGVV 69
Query: 354 AAKGEKVR-NFQIGDEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAA 512
AA G+KV +F++GD V + ++ G+ AQY + L + + + A+A
Sbjct: 70 AAVGDKVEADFKVGDRVVY---LTPFGAYAQYTNVPTTLVSKVSEKIPLKIASA 120
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 38.3 bits (85), Expect = 7e-04
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = +3
Query: 234 EVLVEVKAIAVNPIDTKIRASTSSVETE----PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
+VLVEV A ++NP+D K+ + + P I G+D +G + A G +V+ F V
Sbjct: 45 DVLVEVVATSINPLDYKLMNTYQMIAKALFKLPNIPGYDFAGRVLAVGSEVKEFSATQRV 104
Query: 402 F----FTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAA 509
+ F + GS A ++ + P ++F E A
Sbjct: 105 WGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGA 144
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 33.5 bits (73), Expect = 0.020
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQ 386
+ V K EV V+V AV D + P +LG +G+GI+ + GE V N +
Sbjct: 27 IQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVR 86
Query: 387 IGDEV 401
GD V
Sbjct: 87 PGDHV 91
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 33.5 bits (73), Expect = 0.020
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETE-PRILGWDGSGIIAAKGEKVRNF 383
+PV +DEVLV +K V D + + P I G +G+G++ G V
Sbjct: 26 VPVAEPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRL 85
Query: 384 QIGDEV 401
+IGD V
Sbjct: 86 KIGDRV 91
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 31.1 bits (67), Expect = 0.11
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
P ILG +G+GI+ + G +V Q+GD V
Sbjct: 67 PVILGHEGAGIVESVGPQVTTVQVGDPV 94
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3
Query: 210 PVPTVKED-EVLVEVKAIAVNPIDT---KIRASTSSVETEPRILGWDGSGIIAAKGEKVR 377
P T+ +D +V V +KA + D K + +P ILG + +G++ G+ V
Sbjct: 22 PGQTLTDDHQVKVAIKATGICGSDVHYWKEGGIGDFILKKPMILGHESAGVVVEVGKGVS 81
Query: 378 NFQIGDEV 401
+ + GD V
Sbjct: 82 SLKPGDPV 89
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 433 EPFLLISPVKKTSSPIWKFLTFSPL 359
EP L +K TSSP+W + S L
Sbjct: 1338 EPLNLFPKLKDTSSPLWNLVKTSRL 1362
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 475 GPARISLSARYWAFEPFLLISPVKKTSSPIWKFLTFS 365
G + +S+ F F+ +P + SSPI+K+LT +
Sbjct: 682 GVGKSDISSFLQQFSDFVKKTPQLEESSPIFKYLTIN 718
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 25.0 bits (52), Expect = 6.9
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 135 KTMRAVGLYKHLPITDTDSLLDLVLPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSS 305
+T+R + L +H + S+LD +LP P+ +E E + V+ + + IR+ S
Sbjct: 81 RTLREIKLLRHFRHENIISILD-ILPPPSYQELEDVYIVQELMETDLYRVIRSQPLS 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,044,820
Number of Sequences: 5004
Number of extensions: 39719
Number of successful extensions: 146
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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