Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G03
(525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 45 4e-05
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 42 3e-04
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 32 0.25
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 0.80
SB_42592| Best HMM Match : DUF1640 (HMM E-Value=1.7) 30 1.0
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_39529| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_55454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3176| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7) 28 4.1
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32) 28 5.4
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 27 9.5
SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83) 27 9.5
SB_36110| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7) 27 9.5
SB_19491| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_14313| Best HMM Match : I-set (HMM E-Value=1.8e-21) 27 9.5
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 27 9.5
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 27 9.5
>SB_9859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 54.0 bits (124), Expect = 7e-08
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Frame = +3
Query: 177 TDTDSLLDLVLPVPTVKED-EVLVEVKAIAVNPIDTKIRASTSS-----------VETEP 320
T+TD+L P ++ D EVLV+V A +VNPID ++R + VE P
Sbjct: 10 TETDNLKLETFDTPDIESDAEVLVKVHASSVNPIDVEMRRGYGTNLLNTWRKLVGVEEFP 69
Query: 321 RILGWDGSGIIAAKGEKVRNFQIGDEVFFTGDI---SKNGSNAQYLALNE 461
I G D SG++ G +VR F+ G EV+ T + G +AQYL + +
Sbjct: 70 LICGRDFSGVVVKTGRRVRRFRPGMEVWGTPSVVSAVSRGCHAQYLKVKQ 119
>SB_57921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 48.0 bits (109), Expect = 5e-06
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Frame = +3
Query: 177 TDTDSLLDLVLPVPTVKED-EVLVEVKAIAVNPIDTKIRASTSS-----------VETEP 320
T+TD+L P ++ D EVLV+V A +VNPID ++R + VE P
Sbjct: 82 TETDNLKLETFDTPDIESDAEVLVKVHASSVNPIDVEMRRGYGTNLLNTWRKLVGVEEFP 141
Query: 321 RILGWDGSGIIAAKGEKVRNFQIGDEV 401
I G D SG++ G +VR F+ G EV
Sbjct: 142 LICGRDFSGVVVKTGRRVRRFRPGMEV 168
>SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 47.6 bits (108), Expect = 6e-06
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +3
Query: 234 EVLVEVKAIAVNPIDTKIRASTSSVETE-PRILGWDGSGIIAAKGEKVRNFQIGDEVFFT 410
+VL+++ A +V+P++T IR+ + + E P G G+GII A G++V ++GD V+
Sbjct: 289 QVLIKLSAASVSPVETYIRSGSYARLPELPFTPGNYGAGIIHAIGDEVTKHKVGDHVYTL 348
Query: 411 GDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMPLT 524
++ GS A+Y E SL F E A + +T
Sbjct: 349 STLT--GSYAEYTVCEEDNVFLLHSSLGFSEGANVGIT 384
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +3
Query: 216 PTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPR-ILGWDGSGIIAAKGEKVRNFQIG 392
P + +V+V+V A V D R + +P + G++ SG++ GE+V +G
Sbjct: 61 PKPMQGQVVVKVHACGVTFADLLQRQGHFPLAPKPPYVCGFECSGVVEELGEEVTGIDVG 120
Query: 393 DEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMPLT 524
V ++ G +Y ++ + P+++TFEE AA+P+T
Sbjct: 121 ARVIC---LAPYGMWTEYACVDAKMCYVMPEAMTFEEGAAIPIT 161
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +3
Query: 225 KEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGW------DGSGIIAAKGEKVRNFQ 386
+ D V+V+ A VN D IR E+ + +GW + SG+I KGE V F+
Sbjct: 36 ERDLVVVKTFACGVNYADICIRWGL--YESAKKFVGWPITPGFEFSGVIQWKGENVTEFE 93
Query: 387 IGDEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMP 518
IG EVF S GS ++ + + + PK ++ EAA +P
Sbjct: 94 IGQEVF---GASLFGSYSECIRVPKNQLFALPKKMSKNEAAGLP 134
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 306 VETEPRILGWDGSGIIAAKGEKVRNFQIGDEV 401
V T P +LG + SG+I A GE V + + GD V
Sbjct: 48 VLTAPMVLGHESSGVICAVGEGVSDLKEGDRV 79
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 210 PVPTVKE-DEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQ 386
PVP V EV+V+V + D +I + +LG + SG+++ G V+N
Sbjct: 66 PVPHVSNPSEVIVKVAYSGICDRDLQILEGELPA-AKCVVLGHEFSGVVSDVGSDVKNVS 124
Query: 387 IGDEVFFTGDISKNGSNA 440
IGD V + S N A
Sbjct: 125 IGDRVVVNPNSSCNTCKA 142
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 25.0 bits (52), Expect(2) = 0.80
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 417 ISKNGSNAQYLALNEILAGPKPKSLTFEEA 506
I +NG AQ+ L+ P P +TFE+A
Sbjct: 114 IKRNGGWAQFCRLSAKNVIPLPHQVTFEQA 143
Score = 24.2 bits (50), Expect(2) = 0.80
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 210 PVPTVKED-EVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQ 386
P P V+ +V+V++ AV+ D + + ILG GI+ G V++
Sbjct: 18 PTPHVQSPRDVVVKIAYSAVSGTDLHVLEGRIDC-AKSIILGHQFVGIVKEIGADVQHVS 76
Query: 387 IGDEV 401
+GD V
Sbjct: 77 VGDRV 81
>SB_42592| Best HMM Match : DUF1640 (HMM E-Value=1.7)
Length = 420
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/77 (19%), Positives = 32/77 (41%)
Frame = +3
Query: 231 DEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQIGDEVFFT 410
D + +++ + D + ++TE ++ G + + +N+ +
Sbjct: 190 DSLRQQIRHLKRETCDANVGTPIPELKTEQKLFGLELDFLQVTDSVNEKNYNLDLSTACQ 249
Query: 411 GDISKNGSNAQYLALNE 461
G G NAQYL+LN+
Sbjct: 250 GGSKTTGQNAQYLSLNK 266
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 84 ILATTQVKVLTSKMSLPKTMRAVGLYKHLPITDTDSLLDLVLPVPTVKEDEVLVE--VKA 257
+L T+ + PK + V LP D D+LL V P P V+ + ++A
Sbjct: 216 LLRWTETDRQNRGLHFPKLLHLV----RLPFLDNDTLLRRVEPEPLVQRSPTAKDLVMEA 271
Query: 258 IAVNPIDTKIRASTSSVETEPR 323
+ N D +R + S T PR
Sbjct: 272 MRYNMADEALRHTLQSPRTAPR 293
>SB_39529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -3
Query: 442 WAFEPFLLISPVKKTSSPIWKFLTFSPLAAIIPEPSQPNIRGSVSTLDV 296
W F L+I+ + + WK++ + LA ++P S +I+ +VS++++
Sbjct: 258 WLF--LLMINDLHPPGAQSWKYVDDTTLAKVVPRDSCSSIQAAVSSVEL 304
>SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 291 ASTSSVETEPRILGWDGSGIIAAKGEKVRNFQI 389
A+TS V T+ ++ +DG+G + + G VRN Q+
Sbjct: 407 ANTSFVGTDDVVVKFDGNGDLTSSGYIVRNLQV 439
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 184 VSVIGRCLYRPTALIVFGRDIFDVNTFTCVVASIKTIIRLKAIF 53
+ V C T VFGRDI + +F C + + + KAIF
Sbjct: 1708 IQVFSDCERGTTVFAVFGRDITEFVSFGCDITVFENVKCEKAIF 1751
>SB_55454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +2
Query: 17 SNLYCLLCKIDDEYRLQSDNSFYTRHNTGKSVDVKNV------STENY 142
+N C CKI + R ++DN F++ + + S +K + ST+NY
Sbjct: 76 ANYACAWCKIHKDDRWETDNDFHSFNKSPMSRSLKEIKELCKKSTDNY 123
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +3
Query: 39 VK*TMNIAFSLIIVFILATTQVKVLTSKMSLPKTMRAVGLYKHLPITDTDSLLDLVLPVP 218
V+ T++I+ S +++F ++ + +PK + + +P+ + +D+ P P
Sbjct: 465 VQTTIDISTSTLLLFNTFVSRKDEMPDPTPVPKVQTNIDMPDPIPVPKVQTTVDMPGPTP 524
Query: 219 TVKEDEV 239
K +EV
Sbjct: 525 VPKVEEV 531
>SB_3176| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7)
Length = 177
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +2
Query: 17 SNLYCLLCKIDDEYRLQSDNSFYTRHNTGKSVDVKNV------STENY 142
+N C CKI + R ++DN F++ + + S +K + ST+NY
Sbjct: 9 ANYACAWCKIHKDDRWKTDNDFHSFNKSPMSRSLKEIKELCKKSTDNY 56
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 430 PFLLISPVKKTSSPIWKFLTFSPLAAIIPEPSQPNIRGSVSTL 302
PFL+I P+ S+ +F ++P A ++ PN+R S +
Sbjct: 326 PFLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRSAGAV 368
>SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32)
Length = 884
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 430 PFLLISPVKKTSSPIWKFLTFSPLAAIIPEPSQPNIRGSVSTL 302
PFL+I P+ S+ +F ++P A ++ PN+R S +
Sbjct: 757 PFLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRSAGAV 799
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKV 374
+ V K EV +++ A V D + P ILG +G GI+ + GE V
Sbjct: 21 IEVAPPKAHEVRIKILATGVCHTDAYTLSGVDPEGLFPCILGHEGGGIVESVGEGV 76
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 315 EPRILGWDGSGIIAAKGEKVRNFQIGDEVFFTGDISKNGSNAQ 443
EP G G G+ + G V F + + + G++S NG+ A+
Sbjct: 2552 EPVRFGSSGGGVTSGAGGGVIWFNVTNVIQIDGEVSANGAAAK 2594
>SB_7108| Best HMM Match : Pili_assembly_C (HMM E-Value=0.83)
Length = 401
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 17 SNLYCLLCKIDDEYRLQSDNSFYTRHNTGKSVDVKNV 127
+N C CKI + R ++DN F++ + + S +K +
Sbjct: 361 ANYACAWCKIHKDDRWKTDNDFHSFNKSPMSRSLKEI 397
>SB_36110| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7)
Length = 227
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +2
Query: 17 SNLYCLLCKIDDEYRLQSDNSFYTRHNTGKSVDVKNV------STENY 142
+N C CKI + R ++DN F+ + + S +K + ST+NY
Sbjct: 50 ANYACAWCKIHKDDRWKTDNDFHFFNKSPMSRSLKEIKELCKKSTDNY 97
>SB_19491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 17 SNLYCLLCKIDDEYRLQSDNSFYTRHNTGKSVDVKNV 127
+N C CKI + R ++DN F++ + + S +K +
Sbjct: 76 ANYACAWCKIHKDDRWKTDNDFHSFNKSPMSRSLKEI 112
>SB_14313| Best HMM Match : I-set (HMM E-Value=1.8e-21)
Length = 221
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = -3
Query: 418 ISPVKKTSSPIWKFLTFSPLAAIIPEPSQPNIRGSVSTLDVDARIFVSIGLTAIAXXXXX 239
I+P++ T+ + +T + A P PS + S +F G T
Sbjct: 128 ITPIQNTTVRAGETITLTCAVAGNPTPSVSWSKAG-SGHSTGGNVFTRAGATKADTGQYV 186
Query: 238 XXXXXTVGTGNTKSKRLSVSVIGRCLY 158
TV TGNT++K S V+ +C Y
Sbjct: 187 CTAVNTV-TGNTQTKTASTYVMVKCKY 212
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -3
Query: 418 ISPVKKTSSPIWKFLTFSPLAAIIPEPSQPNIRGSVST 305
I+P+ K+SS + + P+AAI+P+ S +++ +V T
Sbjct: 1071 ITPIVKSSSSLLD--SKKPVAAIVPDISTTDVKSNVDT 1106
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 174 ITDTDSLLDLVLPVPTVKEDEVLVEVKAIAVNPIDTKIRA 293
I D DS + + P TV E + V++ + +DT+ A
Sbjct: 657 IEDNDSEISMKAPSKTVNEGDAKVDIIVLRTGDVDTRKEA 696
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,922,159
Number of Sequences: 59808
Number of extensions: 285817
Number of successful extensions: 794
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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