Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G03
(525 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen... 77 7e-15
At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogen... 70 8e-13
At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogen... 56 1e-08
At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogen... 46 2e-05
At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogen... 41 4e-04
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 40 0.001
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 38 0.003
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 38 0.003
At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP prot... 34 0.067
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 33 0.089
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 33 0.12
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 33 0.12
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 33 0.16
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 32 0.21
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 32 0.21
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 32 0.27
At4g15530.2 68417.m02373 pyruvate phosphate dikinase family prot... 31 0.47
At4g15530.1 68417.m02372 pyruvate phosphate dikinase family prot... 31 0.47
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 31 0.63
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 30 0.83
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 29 2.5
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 29 2.5
At3g09140.1 68416.m01075 expressed protein contains Pfam profile... 29 2.5
At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-... 28 3.3
At1g52370.1 68414.m05910 ribosomal protein L22 family protein s... 28 3.3
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 27 5.8
At5g19200.1 68418.m02286 short-chain dehydrogenase/reductase (SD... 27 7.7
>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
family protein contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 386
Score = 77.0 bits (181), Expect = 7e-15
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Frame = +3
Query: 111 LTSKMSLPKTMRAVGLYKHLPITDTDSLLDLVLPVPTVKEDEVLVEVKAIAVNPIDTKIR 290
+T+ S+PK M+A +Y D L ++ VP +KED+VL++V A A+NP+D K R
Sbjct: 68 VTADASIPKEMKA-WVYSDYGGVDVLKLESNIV-VPEIKEDQVLIKVVAAALNPVDAKRR 125
Query: 291 ASTSSVETE--PRILGWDGSGIIAAKGEKVRNFQIGDEVFFTGDISKN--------GSNA 440
P + G+D +G++ G V++ + GDEV+ ++S+ GS A
Sbjct: 126 QGKFKATDSPLPTVPGYDVAGVVVKVGSAVKDLKEGDEVY--ANVSEKALEGPKQFGSLA 183
Query: 441 QYLALNEILAGPKPKSLTFEEAAAMPL 521
+Y A+ E L KPK++ F +AA +PL
Sbjct: 184 EYTAVEEKLLALKPKNIDFAQAAGLPL 210
>At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to NOGO-interacting
mitochondrial protein from Mus musculus [gi:14522884];
contains Pfam profile: PF00107 zinc-binding
dehydrogenases
Length = 366
Score = 70.1 bits (164), Expect = 8e-13
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSVETEPR---ILGWDGSGIIAAKGEKVR 377
+PVP + +EVLV+ KA++VNP+D +IRA +P I+G D SG +AA G V+
Sbjct: 52 VPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHLPIIVGRDVSGEVAAIGTSVK 111
Query: 378 NFQIGDEVF-FTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMP 518
+ ++G EVF + G+ Y L+E KP S++ EA+A+P
Sbjct: 112 SLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKPSSISHVEASAIP 159
>At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 329
Score = 56.0 bits (129), Expect = 1e-08
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +3
Query: 207 LPVPTVKEDEVLVEVKAIAVNPIDTKIRASTSSV---ETEPRILGWDGSGIIAAKGEKVR 377
+PVPT K +EV ++++A ++NP+D KI+ P I D +G + G V+
Sbjct: 26 VPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVK 85
Query: 378 NFQIGDEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMPL 521
NF+ GD+V G A++ E L +P+ + EAAA+P+
Sbjct: 86 NFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRPQEVGAAEAAALPV 133
>At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogenase
family protein Pig3 Homo sapiens, PID:G2754812; contains
Pfam zinc-binding dehydrogenase domain PF00107
Length = 325
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 216 PTVKEDEVLVEVKAIAVNPIDTKIRAST-SSVETEPRILGWDGSGIIAAKGEKVRNFQIG 392
P VK+DEVL+ V A A+N DT R + LG + SG I + G+ V +++G
Sbjct: 23 PEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPYLGLECSGTIESVGKGVSRWKVG 82
Query: 393 DEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMP 518
D+V + G A+ +++ P P ++ ++AAA P
Sbjct: 83 DQVC---ALLSGGGYAEKVSVPAGQIFPIPAGISLKDAAAFP 121
>At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
zeta-crystallin / quinone reductase (NADPH) - Mus
musculus, PIR:A54932; contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 348
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 PVPTVKED-EVLVEVKAIAVNPID-TKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNF 383
P+P++ D V V V A ++N + +I P I G D SGI+ A G V F
Sbjct: 31 PIPSLNSDTSVRVRVIATSLNYANYLQILGKYQEKPPLPFIPGSDYSGIVDAIGPAVTKF 90
Query: 384 QIGDEVFFTGDISKNGSNAQYLALNEILAGPKPKSLTFEEAAAMPL 521
++GD V D+ GS AQ++ ++ P+ AAA+P+
Sbjct: 91 RVGDRVCSFADL---GSFAQFIVADQSRLFLVPERCDMVAAAALPV 133
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 186 DSLLDLV-LPVPTVKEDEVLVEVKAIAVNPID-TKIRASTSSVETEPRILGWDGSGIIAA 359
DS+ LV LP VKE++V V++ A +NP D +I P + G++G G + A
Sbjct: 57 DSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVYA 116
Query: 360 KGEKVRNFQIGDEV 401
G V F GD V
Sbjct: 117 VGSNVNGFSPGDWV 130
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 213 VPTVKEDEVLVEVKAIAVNPIDT---KIRASTSSVETEPRILGWDGSGIIAAKGEKVRNF 383
+P+V +V V +KA+ + D K V EP ++G + +GII GE+V++
Sbjct: 36 LPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHL 95
Query: 384 QIGDEVFFTGDIS 422
+GD V IS
Sbjct: 96 VVGDRVALEPGIS 108
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 213 VPTVKEDEVLVEVKAIAVNPIDT---KIRASTSSVETEPRILGWDGSGIIAAKGEKVRNF 383
+P+V +V V +KA+ + D K V EP ++G + +GII GE+V++
Sbjct: 36 LPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHL 95
Query: 384 QIGDEVFFTGDIS 422
+GD V IS
Sbjct: 96 VVGDRVALEPGIS 108
>At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP protein
GB:CAA89858 GI:886434 from [Arabidopsis thaliana];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 629
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 234 EVLVEVKAIAVNPIDTKIRASTSSVETEPRI---LGWDGSGIIAAKGEKVRNFQIGDEVF 404
+VL+++ VN D + P++ G++G G+IAA GE V+N ++G
Sbjct: 318 QVLLKIIYAGVNASDVNFSSGRYFTGGSPKLPFDAGFEGVGLIAAVGESVKNLEVGT--- 374
Query: 405 FTGDISKNGSNAQYLALN--EILAGPKP 482
+ G+ ++Y+ ++ +L P+P
Sbjct: 375 -PAAVMTFGAYSEYMIVSSKHVLPVPRP 401
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 33.5 bits (73), Expect = 0.089
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Frame = +3
Query: 228 EDEVLVEVKAIAVNPIDTKI--------RASTSSVETE---PRILGWDGSGIIAAKGEKV 374
E V+ EV+ P++ +I R+ S+ E++ PRI G + +GI+ + GE V
Sbjct: 26 EPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQSLLPRIFGHEAAGIVESIGEGV 85
Query: 375 RNFQIGDEVF--FTGD 416
F+ GD V FTG+
Sbjct: 86 TEFEKGDHVLAVFTGE 101
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEVF--FTGD 416
PRI G + +GI+ + GE V F+ GD V FTG+
Sbjct: 38 PRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGE 72
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV--FFTGD 416
PRILG + +GI+ + GE V GD V FTG+
Sbjct: 81 PRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGE 115
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 225 KEDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQIGDEV- 401
++ EV +++ ++ D + PRI G + GI+ + GE V + Q GD V
Sbjct: 33 QKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVL 92
Query: 402 -FFTGD 416
FTG+
Sbjct: 93 PIFTGE 98
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
PRILG + G+I + GE V FQ GD V
Sbjct: 72 PRILGHEAVGVIESIGEHVNGFQQGDVV 99
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
PRILG + G+I + GE V FQ GD V
Sbjct: 72 PRILGHEAVGVIESIGEHVNGFQQGDVV 99
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
PRILG + G++ + GEKV F+ GD V
Sbjct: 69 PRILGHEAVGVVESIGEKVDGFKQGDVV 96
>At4g15530.2 68417.m02373 pyruvate phosphate dikinase family protein
contains Pfam profiles: PF01326 pyruvate phosphate
dikinase, PEP/pyruvate binding domain, PF02896
PEP-utilizing enzyme, TIM barrel domain
Length = 960
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 129 LPKTMRAVG--LYKHLPITDTDSLLDLVLPVPTVKEDEVLVEVKAIA-VNPI 275
LP T+R + L++ LP D D+++ + VKEDEVL ++ ++ VNP+
Sbjct: 699 LPVTIRLLDPPLHEFLPEGDLDNIVHELAEETGVKEDEVLSRIEKLSEVNPM 750
>At4g15530.1 68417.m02372 pyruvate phosphate dikinase family protein
contains Pfam profiles: PF01326 pyruvate phosphate
dikinase, PEP/pyruvate binding domain, PF02896
PEP-utilizing enzyme, TIM barrel domain
Length = 898
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 129 LPKTMRAVG--LYKHLPITDTDSLLDLVLPVPTVKEDEVLVEVKAIA-VNPI 275
LP T+R + L++ LP D D+++ + VKEDEVL ++ ++ VNP+
Sbjct: 637 LPVTIRLLDPPLHEFLPEGDLDNIVHELAEETGVKEDEVLSRIEKLSEVNPM 688
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 30.7 bits (66), Expect = 0.63
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 234 EVLVEVKAIAVNPID-TKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQIGDEV 401
EV +++ ++ D T + S + PRILG + G++ + GE V F+ GD V
Sbjct: 42 EVRIKILCTSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESIGENVDGFKQGDVV 98
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 30.3 bits (65), Expect = 0.83
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 234 EVLVEVKAIAVNPIDTKIRASTSSVETE-PRILGWDGSGIIAAKGEKVRNFQIGDEVFFT 410
EV V++ ++ D T+ E PRILG + GI+ + GE V++ + GD V T
Sbjct: 37 EVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPT 96
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEV 401
P ILG + +GI+ + GE V Q GD V
Sbjct: 64 PCILGHEAAGIVESVGEGVTEVQAGDHV 91
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 318 PRILGWDGSGIIAAKGEKVRNFQIGDEVFFT 410
PRILG + G++ + GE V+ GD V T
Sbjct: 73 PRILGHEAIGVVESVGENVKEVVEGDTVLPT 103
>At3g09140.1 68416.m01075 expressed protein contains Pfam profile
PF05056: Protein of unknown function (DUF674);
expression supported by MPSS
Length = 473
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 208 NTKSKRLSVSVIGRCLYRPTALIVFGRDIFDVNTFTCVVASIKTIIRL 65
+TKSK+LSV ++ L L G+D DV F+ + + TI+RL
Sbjct: 4 STKSKKLSVRLLIDELKNKVVLAESGKDFVDV-LFSFLALPMGTIVRL 50
>At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-1)
identical to GI:16267
Length = 357
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 228 EDEVLVEVKAIAVNPIDTKIRASTSSVETEPRILGWDGSGIIAAKGEKVRNFQIGDEV 401
E +V +V + D + + + T P + G + G++ G KV+ F GD+V
Sbjct: 33 EKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKV 90
>At1g52370.1 68414.m05910 ribosomal protein L22 family protein
similar to GB:Z67753 from [Odontella sinensis]
Length = 269
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 101 GKSVDVKNVSTENYEGCRSIQTSADNRYRQSLRFSVTSA 217
GK V ++ST NY R++++ Y QSL S S+
Sbjct: 16 GKRVKDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSS 54
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -3
Query: 364 PLAAIIPEPSQPNIRGSVSTLDVDAR 287
P+ +++ +PS+ ++RGS+S + VD R
Sbjct: 382 PILSLLGDPSEFDLRGSISKILVDER 407
>At5g19200.1 68418.m02286 short-chain dehydrogenase/reductase (SDR)
family protein similar to follicular variant
translocation protein 1 precursor (FVT-1) SP:Q06136 from
[Homo sapiens]
Length = 331
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 51 MNIAFSLIIVFILATTQVKVLTSKMSLPKTMRAVGLYKHLPITDTDSLLDLVLPVPTVKE 230
M FSL + FIL + ++ S + P+++ ++H+ IT S + L L V E
Sbjct: 1 MAAIFSLFLFFILFIVSLLIILSFIVRPRSVTIPIKFRHVFITGGSSGIGLALAHRAVSE 60
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,459,528
Number of Sequences: 28952
Number of extensions: 199736
Number of successful extensions: 649
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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