Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_G02
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF100307-11|AAC68929.1|  304|Caenorhabditis elegans Hypothetical...    28   4.9  
AC024793-6|AAF60688.1|  162|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical...    27   8.5  

>Z81124-5|CAB03374.1|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.7 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -1

Query: 232 ILLIENYK-IIIDDFFKYNS*LIPM-YCFINILINYEIFTP 116
           ILL EN   +I+++ F+++  L  + + F+NIL N+ +FTP
Sbjct: 121 ILLFENRSSMILENKFRFSINLYRVIWIFLNILGNFAVFTP 161


>AF100307-11|AAC68929.1|  304|Caenorhabditis elegans Hypothetical
           protein T12B5.3 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -1

Query: 223 IENYKIIIDDFFKYN 179
           +E +KI+IDDFFK N
Sbjct: 220 LERFKIVIDDFFKQN 234


>AC024793-6|AAF60688.1|  162|Caenorhabditis elegans Hypothetical
           protein Y48G1BL.5 protein.
          Length = 162

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 481 VSTITNLWKKSKRTCVAVVDILILFGTKIFIIMLXSR 371
           +ST T+ +  S    +    ++I+FG  IFIIM+ ++
Sbjct: 65  ISTQTSSYSLSSMIVIITFALVIIFGLAIFIIMITTK 101


>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
           protein F49B2.6 protein.
          Length = 1082

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 301 YFKAI-NIVKIRSIIKTSYF*HT*ILLIENYKIIIDDFFKYNS*LIPMYCFINILINYEI 125
           YFK + +    R ++K     HT I  I+   I++D F    + L+ +  + ++L   E 
Sbjct: 735 YFKVLYDPETYRKLVKQLQRNHTTISPIDRSMILVDSFDLSKTSLLNISVYFDLLEYVEK 794

Query: 124 FTPDMTW 104
            T  MTW
Sbjct: 795 ETDKMTW 801


>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
           protein F49B2.6 protein.
          Length = 1082

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 301 YFKAI-NIVKIRSIIKTSYF*HT*ILLIENYKIIIDDFFKYNS*LIPMYCFINILINYEI 125
           YFK + +    R ++K     HT I  I+   I++D F    + L+ +  + ++L   E 
Sbjct: 735 YFKVLYDPETYRKLVKQLQRNHTTISPIDRSMILVDSFDLSKTSLLNISVYFDLLEYVEK 794

Query: 124 FTPDMTW 104
            T  MTW
Sbjct: 795 ETDKMTW 801


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,491,147
Number of Sequences: 27780
Number of extensions: 271101
Number of successful extensions: 546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)