Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_G01
(511 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_15403| Best HMM Match : CH (HMM E-Value=0) 33 0.10
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.14
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 32 0.24
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.24
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 32 0.32
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 31 0.73
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 1.3
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 30 1.3
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 1.7
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 29 1.7
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 29 2.2
SB_26296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98) 28 3.9
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.1
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 28 5.1
SB_21821| Best HMM Match : MRG (HMM E-Value=0) 28 5.1
SB_41585| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 27 9.0
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 33.5 bits (73), Expect = 0.10
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQGRL 489
C +NC ST + PVCGSD TYKN+ L
Sbjct: 3970 CNKNCPSTSK--PVCGSDGKTYKNECEL 3995
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKN 477
+C C+ P+ PVCG+D TY+N
Sbjct: 4236 ECPSRCL--PDKEPVCGADGKTYRN 4258
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKN 477
KC + T EY PVCGSD TY N
Sbjct: 721 KCVCSAACTREYAPVCGSDGNTYNN 745
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKN 477
+C + P Y P+CG+D TY N
Sbjct: 1232 RCECDLRPDPAYDPICGTDGKTYNN 1256
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C ENC ST + PVCGSD TY N+
Sbjct: 275 CPENCSSTVD--PVCGSDNNTYDNE 297
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C ENC ST + PVCG+D TY N+
Sbjct: 161 CPENCSSTVD--PVCGTDNNTYDNE 183
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C ENC ST + PVCGSD TY N+
Sbjct: 1206 CPENCSSTVD--PVCGSDNNTYDNE 1228
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C ENC ST + PVCG+D TY N+
Sbjct: 1135 CPENCSSTVD--PVCGTDNNTYDNE 1157
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKNQ 480
+C+E+C T + PVCGSD Y N+
Sbjct: 1372 ECSEDCPKTLK--PVCGSDNNDYDNE 1395
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C N I T EY PVCG+D +Y N+
Sbjct: 5222 CTCNSICTLEYAPVCGTDGQSYDNE 5246
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C+ I T EY P+CGSD TY NQ
Sbjct: 5152 CSCPDICTFEYSPLCGSDGKTYDNQ 5176
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 433 EYXPVCGSDX*TYKNQ 480
+Y PVCG+D TY+N+
Sbjct: 5558 DYTPVCGTDGETYENE 5573
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +1
Query: 391 QTIEKCAENCISTPEYXPVCGSDX*TYKN 477
Q + C E C T EY PVCGSD TY N
Sbjct: 37 QPVCVCNEAC--TREYAPVCGSDGKTYPN 63
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKN 477
+C + C T +Y PVCGSD TY N
Sbjct: 195 ECPKVC--TLDYTPVCGSDNKTYAN 217
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKNQ 480
+C + C T EY P CG+D TY N+
Sbjct: 278 ECPKAC--TREYKPACGTDGNTYPNR 301
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKNQ 480
C ENC ST + PVCG+D TY N+
Sbjct: 27 CPENCSSTVD--PVCGTDNNTYDNE 49
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 30.7 bits (66), Expect = 0.73
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 403 KCAEN-CISTPEYXPVCGSDX*TYKNQGRLFCAPNC 507
KC ++ + T +Y PVCGSD TY N L A C
Sbjct: 24 KCDDSPTLCTLQYDPVCGSDGKTYGNMCFLKAAIKC 59
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 400 EKCAENCISTPEYXPVCGSDX*TYKN 477
+KCA C Y PVCGSD TY N
Sbjct: 167 DKCAPIC--NKMYQPVCGSDNVTYSN 190
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKN 477
+C C T E PVCGSD TY N
Sbjct: 117 RCMRRC--TKELNPVCGSDGKTYDN 139
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 400 EKCAENCISTPEYXPVCGSDX*TYKN 477
+KCA C Y PVCGSD TY N
Sbjct: 24 DKCAPIC--NKMYQPVCGSDNVTYSN 47
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 391 QTIEKCAENCISTPEYXPVCGSDX*TYKNQ 480
Q + +C C T EY PVCGSD TY +
Sbjct: 42 QPVCECPMAC--TREYAPVCGSDGKTYPTE 69
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 400 EKCAENCISTPEYXPVCGSDX*TYKN 477
+KCA C Y PVCGSD TY N
Sbjct: 38 DKCAPICPKI--YRPVCGSDNVTYSN 61
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 397 IEKCAENCISTPEYXPVCGSDX*TYKNQ 480
I +C N T Y PVCG+D TY N+
Sbjct: 34 IVRCVCNRACTKIYRPVCGTDGKTYGNK 61
>SB_26296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 94 ALLILGFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRP 228
A +I GF+ + C +RY Q+ N +N W+ S NRP
Sbjct: 6 ATIIRGFLKFRIICEKVRYFTQLRACYN--PQQNKWDTSHTNNRP 48
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 427 TPEYXPVCGSDX*TYKNQGRL 489
T +Y PVCGSD TY N+ +
Sbjct: 15 TADYNPVCGSDGRTYPNRASM 35
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKNQ 480
KC C T EY PVCG+D TY N+
Sbjct: 1294 KCPIFC--TYEYMPVCGTDGKTYGNK 1317
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKNQ 480
+C ++T EY PVC SD Y N+
Sbjct: 1966 ECVCRTVTTLEYRPVCASDGKIYPNR 1991
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 403 KCAENCISTPEYXPVCGSDX*TYKNQ 480
KC + + T +Y PVC SD TY N+
Sbjct: 1522 KCRQ--MMTADYTPVCASDGKTYPNR 1545
>SB_15247| Best HMM Match : Hormone_5 (HMM E-Value=0.98)
Length = 997
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +1
Query: 106 LGFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNY 285
LG I SQA NIR Q N +L + N + P+Q GY+ PL +NY
Sbjct: 612 LGQITSQAIGSNIR---QDVANVSLPLQMPISNPKTSVPQGGATPMQFGYQGYGPLQHNY 668
Query: 286 NFIAFIFP 309
+ IFP
Sbjct: 669 GDMNTIFP 676
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +2
Query: 17 LYLYLCYKICHINYFYY----YNLKWISCARFLYWVL 115
++L+ +CH+NY Y+ +++ W+ ++Y V+
Sbjct: 121 IWLFHVSLLCHVNYMYHVIWLFHVSWLCHVNYMYHVI 157
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 406 CAENCISTPEYXPVCGSDX*TYKN 477
C NC S ++ PVCG D TY+N
Sbjct: 579 CPTNCPS--DWDPVCGDDGVTYQN 600
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 433 EYXPVCGSDX*TYKNQGRL 489
E PVCGSD TY+N+ +L
Sbjct: 516 EASPVCGSDGKTYENECKL 534
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 388 RQTIEKCAENCISTPEYXPVCGSDX*TYKNQGRL 489
RQ + C ++ PVCGSD TY N RL
Sbjct: 430 RQAVCACPRFEDCPRDFRPVCGSDLRTYVNLCRL 463
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 415 NCISTPEYXPVCGSDX*TYKNQ 480
NC ST + PVCGSD TY N+
Sbjct: 2 NCSSTVD--PVCGSDNNTYDNE 21
>SB_21821| Best HMM Match : MRG (HMM E-Value=0)
Length = 292
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 109 GFIASQATCMNIRYKRQIENNANLFIDKNGWNKSQDGNRPEWIP 240
G + +A C+ + K E A I NGWNK+ D EW+P
Sbjct: 18 GPLIYEAKCIRGQLK---EKTARYLIHYNGWNKNWD----EWVP 54
>SB_41585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 359 HQLLALVEHHDKQLRNARRIAFQHQNTXPC 448
H L AL +++R RRI+++ QNT C
Sbjct: 84 HSLPALTFESARKVRQYRRISWEGQNTQTC 113
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 397 IEKCAENCISTPEYXPVCGSDX*TYKNQGRLFCA 498
++KC C + + PVCG+D TY N+ L A
Sbjct: 21 VDKCVRPCPAIND--PVCGTDGKTYGNECMLGAA 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,679,409
Number of Sequences: 59808
Number of extensions: 338695
Number of successful extensions: 984
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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