Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F24
         (111 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   0.17 
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    19   4.7  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    19   4.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    19   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   6.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    19   6.2  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
          protein 5 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 0.17
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 3  MKTVLVLA-GLIALVQSSVVSPKTYHFKTKD 92
          MKT ++L  G+  ++ S  V+ KT H  T+D
Sbjct: 1  MKTFVILFFGVFFIIFSDFVNGKTLHRSTRD 31


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 12  VLVLAGLIALVQSSVVSPKTYHFKTKDVDAV 104
           +++LA LIA   ++        +   D+DA+
Sbjct: 3   IIILAVLIATAVAATYDVYPTKYDNVDIDAI 33


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +1

Query: 25  RGSLPSCNP 51
           RGS P C P
Sbjct: 74  RGSCPQCTP 82


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 12  VLVLAGLIALVQSSVVSPKTYHFKTKDVDAV 104
           +++LA LIA   ++        +   D+DA+
Sbjct: 3   IIILAVLIATAVAATYDVYPTKYDNVDIDAI 33


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory
          receptor candidate 46 protein.
          Length = 1451

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 70 VFGDTTLDCTRA 35
          +FG  T  CTR+
Sbjct: 23 IFGFVTFTCTRS 34


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory
          receptor candidate 3 protein.
          Length = 398

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 70 VFGDTTLDCTRA 35
          +FG  T  CTR+
Sbjct: 41 IFGFVTFTCTRS 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,443
Number of Sequences: 336
Number of extensions: 243
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 17
effective length of database: 116,873
effective search space used:  2220587
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)