Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F24
         (111 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.                 30   1.6  
AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein.     30   1.6  
AK074182-1|BAB85008.1|  733|Homo sapiens FLJ00255 protein protein.     30   1.6  
AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens ...    30   1.6  
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.                30   1.6  

>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
          Length = 1866

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
           ++ CP     HCP A + CG  EN+S + ++C
Sbjct: 669 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 698


>AK090439-1|BAC03420.1| 1056|Homo sapiens FLJ00359 protein protein.
          Length = 1056

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
           ++ CP     HCP A + CG  EN+S + ++C
Sbjct: 396 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 425


>AK074182-1|BAB85008.1|  733|Homo sapiens FLJ00255 protein protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
           ++ CP     HCP A + CG  EN+S + ++C
Sbjct: 682 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 711


>AK025362-1|BAB15120.1| 1097|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21709 fis, clone COL10077. ).
          Length = 1097

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
           ++ CP     HCP A + CG  EN+S + ++C
Sbjct: 354 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 383


>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
          Length = 1866

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   YEDCPSSSGAHCPRA-IQCGVTENVSLQDKRC 94
           ++ CP     HCP A + CG  EN+S + ++C
Sbjct: 669 FDGCPLEP--HCPEALVGCGQIENLSFKSRKC 698


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,749,180
Number of Sequences: 237096
Number of extensions: 154269
Number of successful extensions: 597
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 76,859,062
effective HSP length: 17
effective length of database: 72,828,430
effective search space used: 1383740170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)