Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F23
(596 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 25 0.48
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.0
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 23 2.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.5
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 21 6.0
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 21 6.0
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 25.0 bits (52), Expect = 0.48
Identities = 9/42 (21%), Positives = 23/42 (54%)
Frame = -2
Query: 559 NQRSKCRGNMKEKKDKTTGTVKVELIVARSAQRRAATWPSSI 434
N+R+KCR ++++++K+ ++++ A P S+
Sbjct: 177 NRRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAPRSV 218
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.0 bits (47), Expect = 2.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 314 NSCPRPNCRNPV 349
N CP P C PV
Sbjct: 87 NECPEPTCDEPV 98
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.0
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = -1
Query: 467 SAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQTL 288
+ E +++I + + + +++ +P Q L F I+ L + FRT+ G+T+
Sbjct: 323 TTESAKISVIQDDAQMRLNKHVTTTYPKQPLR--FGKILLL------VSSTFRTISGRTI 374
Query: 287 EAAGYAKWAKGQP 249
E + K + P
Sbjct: 375 EDLFFKKVIRDTP 387
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 197 ATLDDTLCDDHLAFICEKDPKKLQT 123
AT+D+ D H + + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = +3
Query: 477 ATISSTLTVPVVLSFFSFMFPLHFDLWLPVVITRSLCG 590
A I +++ FS+ FP++ + + + + + CG
Sbjct: 391 AYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIAACG 428
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 197 ATLDDTLCDDHLAFICEKDPKKLQT 123
AT+D+ D H + + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = +3
Query: 477 ATISSTLTVPVVLSFFSFMFPLHFDLWLPVVITRSLCG 590
A I +++ FS+ FP++ + + + + + CG
Sbjct: 391 AYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIAACG 428
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 197 ATLDDTLCDDHLAFICEKDPKKLQT 123
AT+D+ D H + + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = +3
Query: 477 ATISSTLTVPVVLSFFSFMFPLHFDLWLPVVITRSLCG 590
A I +++ FS+ FP++ + + + + + CG
Sbjct: 391 AYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIAACG 428
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 197 ATLDDTLCDDHLAFICEKDPKKLQT 123
AT+D+ D H + + PKK+ T
Sbjct: 642 ATIDEAASDVHQTHMRIRPPKKIPT 666
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = +3
Query: 477 ATISSTLTVPVVLSFFSFMFPLHFDLWLPVVITRSLCG 590
A I +++ FS+ FP++ + + + + + CG
Sbjct: 391 AYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIAACG 428
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 21.4 bits (43), Expect = 6.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 407 SSRPRLLFHY**WPGGRPPL 466
S+RP L + +PGG PPL
Sbjct: 184 SARPLLPPSFGIFPGGAPPL 203
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 347 LGFYNWDEGNYFRTLDGQTLEA 282
+GF WD+ R+ +G+ EA
Sbjct: 108 IGFIEWDKVEIVRSQEGRFEEA 129
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,301
Number of Sequences: 336
Number of extensions: 2379
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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