Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F23
         (596 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0803 + 11365959-11366390,11366470-11366502,11367158-113672...    28   4.9  
02_05_0797 - 31805956-31806902,31806992-31807505                       28   4.9  

>03_02_0803 +
           11365959-11366390,11366470-11366502,11367158-11367214,
           11367784-11367945,11367987-11368139,11368218-11368295,
           11368377-11368469,11368981-11369071,11369091-11369209
          Length = 405

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 426 CFTIDDGQVAALR*ADRATISSTLTVPVVLSFFS 527
           CF++D G    L  ++ A  S+TL+ P VLSF S
Sbjct: 33  CFSLDAGHRCLLLGSNGAGNSTTLSGPSVLSFLS 66


>02_05_0797 - 31805956-31806902,31806992-31807505
          Length = 486

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 446 PGGRPPLSRSRHDKLYLNCTCSLVLFLFHVPSAF*SLVA 562
           P G PP S S +D +  +       FL H P+AF +L+A
Sbjct: 70  PDGLPPPSESDNDDVTQDIPTVCTSFLTHGPAAFGALLA 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,259,448
Number of Sequences: 37544
Number of extensions: 277628
Number of successful extensions: 744
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)