Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F23
         (596 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)              38   0.006
SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.)               36   0.025
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.043
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)              33   0.18 
SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_1159| Best HMM Match : 7tm_3 (HMM E-Value=1.4e-28)                  29   2.9  
SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.8  
SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  

>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
          Length = 276

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
 Frame = -1

Query: 473 ICSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQ 294
           +C  +G  LA I  E E + LR   ++ P  +    F     +G  + ++   +   DG 
Sbjct: 154 LCEQDGAMLAYIEDEEEFQFLRR--SRPPGSSTNQYF-----IGLRSANDSKTWLWPDGT 206

Query: 293 TLEAAGYAKWAKGQPDNQFSRQKQNCGGM-FR---DATLDDTLCDDH--LAFICEKDPKK 132
               A + KWAKG+P+N +    ++C  M FR   + + +D LC +     +IC+  P  
Sbjct: 207 K---AKFFKWAKGEPNN-YQGNTEDCVAMDFRSLSNGSYNDVLCQESSVSGYICKGSPMP 262

Query: 131 L 129
           L
Sbjct: 263 L 263


>SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 406

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 266 WAKGQPDNQFSRQKQNCGGM-FRDATLDDTLCDDHLAFICEK 144
           W  G+P+N  SR  +NC  M + D   +D LC +   ++CEK
Sbjct: 109 WGYGEPNNYMSR-GENCSEMRYWDGMWNDVLCVNKYGYVCEK 149


>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2516

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
 Frame = -1

Query: 470 CSAEGGHLAIINSETEAEVLRNLFAQHPAQTLTVSFDVIIRLGFYNWDEGNYFRTLDGQT 291
           C   GG+L  +++  E   L  +      Q   +  +     G Y W+  N   T  GQ 
Sbjct: 150 CHQSGGYLVKVDNSDEQHFLSYMMKTVMKQAAWIGLNDRAIEGTYVWEGDN---TKLGQN 206

Query: 290 LEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLCDDHLAFICEK 144
                Y+ W  G+P++  S   ++C  M+  +     +D  CD   A++CEK
Sbjct: 207 -----YSHWYSGEPNDHAS--VEDCISMYSGSLGGFWNDDYCDTLRAYVCEK 251



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 275 YAKWAKGQPDNQFSRQKQNCGGMFRDATLDDTLCDDHLAFICE 147
           Y  W +G+P+N F   +     +++D   +D  C    +FIC+
Sbjct: 73  YTNWRRGEPNN-FQDNEDCTELLYQDGLWNDDDCSKEYSFICK 114


>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
          Length = 131

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
 Frame = -1

Query: 314 FRTLDGQTLEAAGYAKWAKGQPDNQFSRQKQNCGGMFRDATL----DDTLCDD--HLAFI 153
           F  +DG TL ++ Y+ W   QPDN  S   +NCG       L    +D  C++    A  
Sbjct: 68  FFWVDGTTLTSSSYSAWYPPQPDN--SGGHENCGHFLLSGKLARRWNDISCNNSYQFAIA 125

Query: 152 CEK 144
           C+K
Sbjct: 126 CQK 128


>SB_58330| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 631

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -1

Query: 278 GYAKWAKGQPDNQFSRQKQNCGGMFRDAT---LDDTLCDDHLAFICE 147
           G   WA GQP  + + Q+++C  M    +     D  C + L FIC+
Sbjct: 346 GRPNWAPGQPTGRSNGQEKDCVAMVMHPSPGKWHDEYCLNQLPFICK 392


>SB_1159| Best HMM Match : 7tm_3 (HMM E-Value=1.4e-28)
          Length = 562

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 443 WPGGRPPLSRSRHDKLYLNCTCSLVLFLF 529
           WPGG PP  R R  + Y   + S+VLF+F
Sbjct: 63  WPGGSPPSDRIR--RAYQLQSVSVVLFVF 89


>SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 318

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 188 DDTLCDDHLAFICEKD-PKKLQTAKIAPRT 102
           +D  CD    +ICEKD PK++     AP T
Sbjct: 210 NDNSCDHQQGYICEKDKPKEVLATGDAPHT 239


>SB_19212| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 513

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = -2

Query: 157 LFVKKTRRSYKRLR*LLEPL--DSESCNYILKRYSSLF 50
           +FVK+ R+SYK L+   E L  DS S +  + R ++LF
Sbjct: 117 IFVKEIRKSYKNLKTRSELLCGDSHSSSRFIHRMTNLF 154


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,471,425
Number of Sequences: 59808
Number of extensions: 315097
Number of successful extensions: 793
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)