Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F22
(452 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E45E0A Cluster: PREDICTED: similar to myo-inosit... 140 1e-32
UniRef50_Q9UGB7 Cluster: Inositol oxygenase; n=34; Eukaryota|Rep... 123 2e-27
UniRef50_Q8X0P7 Cluster: Probable aldehyde reductase 6; n=1; Neu... 118 8e-26
UniRef50_Q5KDR9 Cluster: Inositol oxygenase, putative; n=17; cel... 117 1e-25
UniRef50_A7F502 Cluster: Putative uncharacterized protein; n=1; ... 116 2e-25
UniRef50_Q54GH4 Cluster: Putative uncharacterized protein; n=1; ... 115 4e-25
UniRef50_Q8H1S0 Cluster: Inositol oxygenase 4; n=17; Eukaryota|R... 106 2e-22
UniRef50_A5FF81 Cluster: Inositol oxygenase; n=3; Bacteria|Rep: ... 104 8e-22
UniRef50_A4AW78 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_A7P6Y9 Cluster: Chromosome chr9 scaffold_7, whole genom... 79 3e-14
UniRef50_Q752U1 Cluster: AFR482Wp; n=10; Ascomycota|Rep: AFR482W... 78 8e-14
UniRef50_Q65CM5 Cluster: Putative uncharacterized protein C54E4.... 64 1e-09
UniRef50_UPI0000E25BF3 Cluster: PREDICTED: similar to kidney-spe... 61 1e-08
UniRef50_A6V8T9 Cluster: Membrane protein, putative; n=7; Pseudo... 36 0.54
UniRef50_Q468R1 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_A0BHI2 Cluster: Chromosome undetermined scaffold_108, w... 33 2.2
UniRef50_Q2YCS0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_A7GHW9 Cluster: Glycosyl transferase, group 1 family pr... 33 3.8
UniRef50_A6CJF8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_O94600 Cluster: Conserved eukaryotic protein; n=1; Schi... 32 5.0
UniRef50_Q18A11 Cluster: PTS system, IIabc component; n=3; Clost... 31 8.7
>UniRef50_UPI0000E45E0A Cluster: PREDICTED: similar to myo-inositol
oxygenase; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to myo-inositol oxygenase -
Strongylocentrotus purpuratus
Length = 312
Score = 140 bits (339), Expect = 1e-32
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR- 188
SF DNPD +P+YNT G+Y+ NCGL + +SWGHDEYLY VLV NK+ P +GLY R
Sbjct: 187 SFTDNPDLNDPRYNTRLGIYKENCGLSKVTMSWGHDEYLYHVLVKNKTTLPDEGLYMVRF 246
Query: 189 *DFIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
F RG D+E+ K + EFNQ+DLY+KS ++P+I+AL PYY+SLI+
Sbjct: 247 HSFYPWHRGNEYTFLM---DNKDKEMMKWIHEFNQFDLYSKSDSVPNIDALRPYYQSLID 303
Query: 369 KYIPGVLEW 395
KY+PG L+W
Sbjct: 304 KYLPGKLKW 312
>UniRef50_Q9UGB7 Cluster: Inositol oxygenase; n=34; Eukaryota|Rep:
Inositol oxygenase - Homo sapiens (Human)
Length = 285
Score = 123 bits (296), Expect = 2e-27
Identities = 55/128 (42%), Positives = 80/128 (62%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR* 191
+F+DNPD +P+Y+TE GMY+P+CGL+ +++SWGHDEY+Y+V+ NK P + Y R
Sbjct: 160 TFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIR- 218
Query: 192 DFIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIEK 371
F + D + V EFN++DLYTK +PD++ L PYY+ LI+K
Sbjct: 219 -FHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDK 277
Query: 372 YIPGVLEW 395
Y PG+L W
Sbjct: 278 YCPGILSW 285
Score = 40.3 bits (90), Expect = 0.019
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 188 IRFHSFYPWHAGGDYEHLLKE 250
IRFHSFYPWH G DY+ L +
Sbjct: 217 IRFHSFYPWHTGRDYQQLCSQ 237
>UniRef50_Q8X0P7 Cluster: Probable aldehyde reductase 6; n=1;
Neurospora crassa|Rep: Probable aldehyde reductase 6 -
Neurospora crassa
Length = 352
Score = 118 bits (283), Expect = 8e-26
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR* 191
SF NPD+ + Y+TE+G+Y P CG+ENLM+SWGHDEYLY+V V ++S P++GL R
Sbjct: 227 SFSANPDSGHAVYSTEHGIYAPGCGIENLMMSWGHDEYLYQV-VKDQSTIPREGLAMIR- 284
Query: 192 DFIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIEK 371
F K+GDEE+++AV FN YDLY+KS D+EA+ PYY LI++
Sbjct: 285 -FHSFYPWHREEAYGWAMKEGDEELRRAVRAFNPYDLYSKSDEPVDVEAVKPYYMELIDE 343
Query: 372 YIPG-VLEW 395
+ P V++W
Sbjct: 344 FFPNKVIKW 352
Score = 35.9 bits (79), Expect = 0.41
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +2
Query: 188 IRFHSFYPWHAGGDYEHLLKEG 253
IRFHSFYPWH Y +KEG
Sbjct: 283 IRFHSFYPWHREEAYGWAMKEG 304
>UniRef50_Q5KDR9 Cluster: Inositol oxygenase, putative; n=17;
cellular organisms|Rep: Inositol oxygenase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 359
Score = 117 bits (281), Expect = 1e-25
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR- 188
+F DNPD +P Y+T+YG+YEPNCGL+ +M+SWGHDEYLY V +S P+ L R
Sbjct: 235 TFGDNPDLKHPTYSTKYGIYEPNCGLDKVMISWGHDEYLYMV-CKEQSSLPQAALNMIRY 293
Query: 189 *DFIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
F R + + D++ K VL FN YDLY+KS +PD AL PYYE LI
Sbjct: 294 HSFYPWHRERAYTYLES---EADKQTLKDVLAFNPYDLYSKSDTLPDPVALRPYYEGLIA 350
Query: 369 KYIPGVLEW 395
K+ P + W
Sbjct: 351 KFFPEKINW 359
>UniRef50_A7F502 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 247
Score = 116 bits (279), Expect = 2e-25
Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR* 191
+FK+NPD +NPKYNT+YG+Y PNCGL+N+M+S+GHDEYLY V V S P++ L R
Sbjct: 122 TFKNNPDYHNPKYNTKYGVYSPNCGLDNVMMSYGHDEYLYHV-VKKWSTLPQEALDMIRY 180
Query: 192 DFIRS--TRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLI 365
S ++G + N + DE+ AV +FN YDLY+K+ P++E L PYY LI
Sbjct: 181 HSFYSMHSKGKYKHLMN----EDDEKRLAAVKKFNPYDLYSKADEPPNVEELKPYYIELI 236
Query: 366 EKYIP-GVLEW 395
++ P ++EW
Sbjct: 237 NEFFPQEIIEW 247
>UniRef50_Q54GH4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 292
Score = 115 bits (277), Expect = 4e-25
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 FKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*D 194
FK NPD + KYN+E G+Y+ N GLEN+ +SWGHDEY Y V V NK PK+ LY R
Sbjct: 168 FKMNPDYNDSKYNSECGIYKKNIGLENVTMSWGHDEYFYLVCVGNKCLLPKESLYMIRFH 227
Query: 195 --FIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
+ +TN + DE++ V EFN++DLY+K + D+E+L PYY+SLI
Sbjct: 228 SFYPWHRHNKYTHLTN----EEDEKMLNWVKEFNKFDLYSKDSEPVDVESLKPYYQSLIS 283
Query: 369 KYIPGVLEW 395
KY P L W
Sbjct: 284 KYFPNELHW 292
>UniRef50_Q8H1S0 Cluster: Inositol oxygenase 4; n=17; Eukaryota|Rep:
Inositol oxygenase 4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 317
Score = 106 bits (255), Expect = 2e-22
Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 FKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*D 194
F +NPD +N YNT+ G+Y CGL N+M+SWGHD+Y+Y V N S P G + R
Sbjct: 193 FVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVAKENGSTLPSAGQFIIRYH 252
Query: 195 --FIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
+ T G + N + D+E K + FN+YDLY+KS D+E + PYY SLI+
Sbjct: 253 SFYPLHTAGEYTHLMN----EEDKENLKWLHVFNKYDLYSKSKVHVDVEKVKPYYMSLIK 308
Query: 369 KYIPGVLEW 395
KY P L W
Sbjct: 309 KYFPENLRW 317
>UniRef50_A5FF81 Cluster: Inositol oxygenase; n=3; Bacteria|Rep:
Inositol oxygenase - Flavobacterium johnsoniae UW101
Length = 295
Score = 104 bits (250), Expect = 8e-22
Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 FKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*D 194
FK+NPD + ++NT+ G+Y NCGL+N+ +SWGHDEYLY+++ K P LY R
Sbjct: 174 FKENPDYTDERFNTKLGIYTENCGLDNVKMSWGHDEYLYQIM---KDYLPDPALYMIRYH 230
Query: 195 --FIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
+ + + N + D E+ V +FN YDLYTK+ PD++AL PYY+ L+
Sbjct: 231 SFYSQHKENAYAHLMN----EKDIEMFDWVRKFNPYDLYTKAPVKPDVQALLPYYKELVA 286
Query: 369 KYIPGVLEW 395
KY+P L++
Sbjct: 287 KYLPEKLKF 295
>UniRef50_A4AW78 Cluster: Putative uncharacterized protein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
uncharacterized protein - Flavobacteriales bacterium
HTCC2170
Length = 270
Score = 91.1 bits (216), Expect = 1e-17
Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Frame = +3
Query: 24 NPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKS-KFPKKGLYKXR*D-- 194
N D N KYNT+ G+Y+ CGL+N+ ++WGHDEYLY+VL ++KS K P++ + R
Sbjct: 147 NVDMDNDKYNTDLGIYDKGCGLDNVDLAWGHDEYLYQVLNNHKSNKLPEEAMVMIRYHSF 206
Query: 195 FIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIEKY 374
+ T G+ + + + D + + + +FN+YDLYTKS I D+E + YY + +KY
Sbjct: 207 YPWHTGGSYGELLS----EKDGQYLEWIRDFNKYDLYTKSQKIYDLEDVIDYYRPIADKY 262
Query: 375 I-PGVLEW 395
+ G + W
Sbjct: 263 LGSGPIYW 270
>UniRef50_A7P6Y9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 153
Score = 79.4 bits (187), Expect = 3e-14
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +3
Query: 18 KDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGL 176
K+NPD +NP YNT+YG+Y CGLEN+M+SWGHD+Y+Y V K+ P GL
Sbjct: 43 KENPDDHNPAYNTKYGVYSEGCGLENVMMSWGHDDYMYLVAKEKKTTLPAAGL 95
>UniRef50_Q752U1 Cluster: AFR482Wp; n=10; Ascomycota|Rep: AFR482Wp -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 354
Score = 78.2 bits (184), Expect = 8e-14
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 15 FKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*D 194
F+ N D +P Y+ + G+Y NCGL ++M+SWGHDEY+Y + +S K L R
Sbjct: 230 FEGNADKNHPIYSQKLGIYHENCGLASVMLSWGHDEYMY-YIAKGQSLLNDKALAMIRYH 288
Query: 195 --FIRSTRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIE 368
+ G + + + D E+ +AV +FN+YDLY+K+ D+ L YY+ LI
Sbjct: 289 SFYPWHREGAYRYLMD----ESDYELLEAVQDFNKYDLYSKTNKKYDVGELKEYYQDLIN 344
Query: 369 KYIP 380
++ P
Sbjct: 345 EFFP 348
Score = 37.5 bits (83), Expect = 0.13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 188 IRFHSFYPWHAGGDYEHLLKE 250
IR+HSFYPWH G Y +L+ E
Sbjct: 285 IRYHSFYPWHREGAYRYLMDE 305
>UniRef50_Q65CM5 Cluster: Putative uncharacterized protein C54E4.5;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein C54E4.5 - Caenorhabditis elegans
Length = 193
Score = 64.5 bits (150), Expect = 1e-09
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRV 137
SF NPD +P Y T+ GMY+ CG+ENL+++W HDEY+Y+V
Sbjct: 151 SFDGNPDISHPVYGTQMGMYQEKCGMENLLMTWSHDEYMYKV 192
>UniRef50_UPI0000E25BF3 Cluster: PREDICTED: similar to
kidney-specific protein 32; n=1; Pan troglodytes|Rep:
PREDICTED: similar to kidney-specific protein 32 - Pan
troglodytes
Length = 431
Score = 60.9 bits (141), Expect = 1e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 276 VLEFNQYDLYTKSAAIPDIEALWPYYESLIEKYIPGVLEW 395
V EFN++DLYTK +PD++ L PYY+ LI+KY PG+L W
Sbjct: 392 VQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 431
>UniRef50_A6V8T9 Cluster: Membrane protein, putative; n=7;
Pseudomonas|Rep: Membrane protein, putative -
Pseudomonas aeruginosa PA7
Length = 679
Score = 35.5 bits (78), Expect = 0.54
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 155 KVPQKRSLQX*IRFHSFYPWHAGGDYEHLLKEGRRGDQESCSR 283
KV ++R L H+ PW + E LL+EGRRG+ ESC R
Sbjct: 254 KVARERRLLDPASAHALQPWLE--EVETLLREGRRGEFESCRR 294
>UniRef50_Q468R1 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Putative
uncharacterized protein - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 466
Score = 33.9 bits (74), Expect = 1.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 30 DTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLY 131
DTY KY+T + EP G ++ + + G+D+YLY
Sbjct: 156 DTYPEKYDTPVYIQEPAEGYDDYLYTEGYDDYLY 189
>UniRef50_A0BHI2 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 445
Score = 33.5 bits (73), Expect = 2.2
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 204 STRGTLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIEKYIPG 383
ST+ L+++ + ++ ++ +LE L K+ P I+ + Y+ S + KY P
Sbjct: 61 STQRYLMLLATFYCQQNSVNYQQGMLEVVAPFLVMKNRDFP-IQKCYAYFNSFMNKYFPK 119
Query: 384 VLEW 395
VLEW
Sbjct: 120 VLEW 123
>UniRef50_Q2YCS0 Cluster: Putative uncharacterized protein; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Putative
uncharacterized protein - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 448
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 36 YNPKYNTEYGMY-EPN-CGLENLMVSWGHDEYLYRVLVHNKSKFPKKG 173
Y P++ T+ ++ +P+ CG LM+S GHDEY + F KG
Sbjct: 193 YQPEFCTDLDIHSDPDLCGRYRLMLSVGHDEYWSETIRDRTEDFVSKG 240
>UniRef50_A7GHW9 Cluster: Glycosyl transferase, group 1 family
protein; n=5; Clostridium|Rep: Glycosyl transferase,
group 1 family protein - Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F)
Length = 364
Score = 32.7 bits (71), Expect = 3.8
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 18 KDNPDTYNPKYNTEYGMYEPNCGLENLMVS-WGHDEYLYRVLVHNKSKFPKKGLYKXR*D 194
K PD + Y T YG+ G ++S WG D Y + + K K + L K D
Sbjct: 77 KIKPDVVHAHYATSYGLLGALSGFHPYIISVWGSDVYDFPKGSYVKRKMVEYNLSKA--D 134
Query: 195 FIRSTRGTLVVITNTF*KKGDE 260
I ST + TN + K E
Sbjct: 135 IIMSTSKVMAKETNRYTTKNIE 156
>UniRef50_A6CJF8 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 237
Score = 32.7 bits (71), Expect = 3.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 258 EEIKKAVLEFNQYDLYTKSAAIPDIEALWPYYESLIEKYIPGVLEW 395
+ +K + Q+D+ A +P ++ + YY+++ EKY P + W
Sbjct: 112 DNLKAIITNIKQHDIIPVVATLPPLDPV-RYYKNISEKYSPAISHW 156
>UniRef50_O94600 Cluster: Conserved eukaryotic protein; n=1;
Schizosaccharomyces pombe|Rep: Conserved eukaryotic
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 1098
Score = 32.3 bits (70), Expect = 5.0
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 450 VKCHIEC-YNYCSLAHHFLTIRVRRVCISRLET 355
V+C +E Y C+LA F+T R+R+ + RLET
Sbjct: 889 VECALETIYQVCALADDFMTSRIRQDLLPRLET 921
>UniRef50_Q18A11 Cluster: PTS system, IIabc component; n=3;
Clostridium difficile|Rep: PTS system, IIabc component -
Clostridium difficile (strain 630)
Length = 625
Score = 31.5 bits (68), Expect = 8.7
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 216 TLVVITNTF*KKGDEEIKKAVLEFNQYDLYTKSAAIPDIEALWP--YYESLIEKYIPGVL 389
TL T T G+E ++ L + YT S+ IP I A+W Y E ++EKYIP V+
Sbjct: 187 TLCYPTFTALMAGEESVRFLGLAVTKAT-YT-SSVIPIIIAIWALSYVEKVLEKYIPEVI 244
Query: 390 E 392
+
Sbjct: 245 K 245
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,134,318
Number of Sequences: 1657284
Number of extensions: 8346983
Number of successful extensions: 22034
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22018
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -