Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F22
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 64 3e-11
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 31 0.52
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 31 0.52
AL117204-44|CAN86917.1| 148|Caenorhabditis elegans Hypothetical... 29 2.1
AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical... 29 2.1
Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 27 4.8
AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical ... 27 6.4
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 27 8.4
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 27 8.4
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 64.5 bits (150), Expect = 3e-11
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 12 SFKDNPDTYNPKYNTEYGMYEPNCGLENLMVSWGHDEYLYRV 137
SF NPD +P Y T+ GMY+ CG+ENL+++W HDEY+Y+V
Sbjct: 151 SFDGNPDISHPVYGTQMGMYQEKCGMENLLMTWSHDEYMYKV 192
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 30.7 bits (66), Expect = 0.52
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 48 YNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*DFIRSTRGT 218
Y+ YG Y L N+M HD Y Y+ HN + F G+++ F+ ST T
Sbjct: 286 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSAGF---GVFRWLLPFLGSTHCT 335
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 30.7 bits (66), Expect = 0.52
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 48 YNTEYGMYEPNCGLENLMVSWGHDEYLYRVLVHNKSKFPKKGLYKXR*DFIRSTRGT 218
Y+ YG Y L N+M HD Y Y+ HN + F G+++ F+ ST T
Sbjct: 403 YSINYGTYR----LANIMTDLQHDVYFYQFDYHNSAGF---GVFRWLLPFLGSTHCT 452
>AL117204-44|CAN86917.1| 148|Caenorhabditis elegans Hypothetical
protein Y116A8C.26b protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 67 CTSPTVDSRI*WYLGDTTSTYTGFWCTT 150
C SP +D + LG+ T Y GFW T
Sbjct: 92 CNSPQLDLVLEQILGNITRDYVGFWYKT 119
>AL117204-43|CAB55131.2| 917|Caenorhabditis elegans Hypothetical
protein Y116A8C.26a protein.
Length = 917
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 67 CTSPTVDSRI*WYLGDTTSTYTGFWCTT 150
C SP +D + LG+ T Y GFW T
Sbjct: 92 CNSPQLDLVLEQILGNITRDYVGFWYKT 119
>Z81593-3|CAB04741.1| 332|Caenorhabditis elegans Hypothetical
protein T20B3.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 325 GIAALFVYKSYWLNSRTAFLISSSPFF*KVFVITTSVP 212
G A+F Y + + N+ T +ISS FF + ++ P
Sbjct: 262 GFTAIFDYHNQFFNNLTLIIISSHGFFSTIAMVALHAP 299
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 215 HAGGDYEHLLKEGRRGDQESCSRV*PIRLVHKER 316
HA G HL+ GRR + E SR+ I + H ER
Sbjct: 256 HAIGHVPHLV--GRRAESEKLSRILKIVIEHDER 287
>AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical
protein K11D12.6 protein.
Length = 186
Score = 27.1 bits (57), Expect = 6.4
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 447 KCHIECYNYCSLAHHFLTIRVRRVCISRLETRSKA---RELLCPGSRRSLCTSRIG 289
KC NYC HH VC S LE+R K REL+CP ++ T R G
Sbjct: 104 KCAEPNKNYC---HH--GPNNNGVCCS-LESRKKVDQDRELVCPNGKKKYATFRGG 153
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 109 GDTTSTYTGFWCTTNQSSPKKVFTXLDKISFVL 207
G +TS+ W TT S P ++FT + +L
Sbjct: 525 GTSTSSIKANWTTTGVSCPSEIFTSPNTFEILL 557
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 109 GDTTSTYTGFWCTTNQSSPKKVFTXLDKISFVL 207
G +TS+ W TT S P ++FT + +L
Sbjct: 527 GTSTSSIKANWTTTGVSCPSEIFTSPNTFEILL 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,926,361
Number of Sequences: 27780
Number of extensions: 201678
Number of successful extensions: 568
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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