Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F21
(252 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr 2|... 44 2e-06
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 26 0.88
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 25 1.2
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 25 1.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 2.0
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 24 3.5
SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces... 23 4.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 23 4.7
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 23 4.7
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 23 6.2
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 23 6.2
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 23 6.2
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 23 6.2
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 23 8.2
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 23 8.2
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 23 8.2
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 23 8.2
SPCC1322.11 |rpl2302|rpl23-2|60S ribosomal protein L23|Schizosac... 23 8.2
SPAC15E1.06 |vps29||retromer complex subunit Vps29|Schizosacchar... 23 8.2
SPAC3G9.03 |rpl2301|rpl23-1|60S ribosomal protein L23|Schizosacc... 23 8.2
SPAC630.10 |||conserved fungal protein|Schizosaccharomyces pombe... 23 8.2
>SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 44.4 bits (100), Expect = 2e-06
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Frame = +3
Query: 3 LDEQKVQSLMDTI------------QKEEESGNVPXIDILWIKGTECGNYYYSFGGCHRY 146
LD KV S+M+T+ ++ E+G +P +D+L K + YY++FGGCHR
Sbjct: 28 LDMNKVNSMMETMTGKTPPASCGLTSEDLEAGELPPVDVLTFKKSG-KPYYFAFGGCHRL 86
Query: 147 AAYKRLNRQTIPGKLIRSTVTDLK 218
A+ R+ + KL+ + L+
Sbjct: 87 RAHDEAGRKKVRCKLVNCSPNTLR 110
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 0.88
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 124 VSVVATDTPRTNASTGRRYPVNSSDPPSQISKTYLGRSTP 243
VS + RTN R+ N++D SQI L RSTP
Sbjct: 148 VSRPPSSMSRTNLDVSSRWD-NTADNDSQIDAQDLSRSTP 186
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 25.4 bits (53), Expect = 1.2
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 247 SRAYCGLNKSLRSVTVDLMSLPGIVCRLRRLYAA-YLWQPPKL 122
++ + GL+ ++ V+ ++ P C+ R AA YLWQ PKL
Sbjct: 169 AKEFFGLSSKPQTEEVEKLTKP---CKPYRTIAAWYLWQIPKL 208
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 1.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 3 LDEQKVQSLMDTIQKEEESGNVPXIDILWIKGTECGNYY 119
LD QS + Q ++ V ID+LW+ C +YY
Sbjct: 61 LDVTSQQSANEAAQSVAKA--VDGIDVLWLNSGICQSYY 97
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 24.6 bits (51), Expect = 2.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 118 IIVSVVATDTPRTNASTGRRYPVNSSDPPSQISK 219
I+ S TP+ +ST + +S PPS SK
Sbjct: 649 ILKSTQVPVTPKQKSSTANKGSTSSPSPPSSESK 682
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 23.8 bits (49), Expect = 3.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 150 AYKRLNRQTIPGK-LIRSTVTDLKDLFRPQYARL 248
A K + T P + L++ + T KD+F+P+Y +L
Sbjct: 208 ATKAFSHLTQPKRALLKESNTGDKDIFKPRYPQL 241
>SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 23.4 bits (48), Expect = 4.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 61 VMYRP*TYSGSKVPNVETIIIVSVVATDTPRTNASTGRRYPVNSSD 198
V Y P +S SK+P+ + S + + T G P +SSD
Sbjct: 26 VFYTPKCFSNSKLPHQSDLEEPSSACSLSKNTIIDGGADEPYDSSD 71
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 23.4 bits (48), Expect = 4.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 67 YRP*TYSGSKVPNVETIIIVSVVATDTPRTNASTGRRYPVNSSDPPS 207
Y P T SG++VP V+ + P++ + R + + PPS
Sbjct: 935 YHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPS 981
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 127 SVVATDTPRTNASTGRRYPVNSSDPPSQISKTY 225
SV P AS P +S PP ++ +TY
Sbjct: 903 SVSTLPPPPPTASMTASAPAIASPPPPKVGETY 935
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 23.4 bits (48), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 94 KVPNVETIIIVSVVATDTP 150
K PNV I+ S+V++D P
Sbjct: 2459 KTPNVLETILTSIVSSDMP 2477
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 75 IDILWIKGTECGNYYYSFGGCHRYA 149
I++ I + YY++ GG H YA
Sbjct: 196 INLYTITMSPSNPYYFAIGGTHPYA 220
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 23.0 bits (47), Expect = 6.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 167 VEAFVRGVSVATTETIIIVSTFGTFDPEYVYGRYITGL 54
+E F+R V V + I + GTF+ GR I L
Sbjct: 191 LELFLRNVLVHNDQRAISAAPEGTFERHVGKGRQIQSL 228
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 23.0 bits (47), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 162 GVCTRRICGNHRNYNNSFHIRYL 94
G+C+R IC H N SF+I L
Sbjct: 381 GICSRWICDLHE--NTSFNIDIL 401
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 23.0 bits (47), Expect = 6.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 125 TIIIVSTFGTFDPEYVYGRYITGLFFL 45
T I ++ + P + G Y+TG+ F+
Sbjct: 574 TYIYMTPTTSVQPSQILGNYVTGITFM 600
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 22.6 bits (46), Expect = 8.2
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +2
Query: 5 GRAESAIANGHYSEGXXXXXXXXXXXXLDQR 97
G AE ++NG Y+ G +DQ+
Sbjct: 50 GTAEGIVSNGEYAVGAMGAAPTNIIGSVDQQ 80
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 3 LDEQKVQSLMDTIQKEEESGNVPXIDILWIKGTECGNYYY 122
L +K + Q+EE S +D+ + + G+YYY
Sbjct: 56 LSSEKDRQQYQIKQEEESSHYYSIVDLSEFEELDNGSYYY 95
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 136 ATDTPRTNASTGRRYPVNSSDPPSQISKTYLGRSTP 243
A D+ TN+ G P +S S++ +T +TP
Sbjct: 190 APDSSSTNSFGGLLLPNQNSPKKSELGETESSNTTP 225
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 88 GSKVPNVETIIIVSVVATDTPRTNASTGR 174
G + N +T+IIV V+ D P A R
Sbjct: 452 GILLRNGDTLIIVDVIECDDPSARAVKDR 480
>SPCC1322.11 |rpl2302|rpl23-2|60S ribosomal protein
L23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 173 LPVEAFVRGVSVATTETIIIVSTFGT 96
LPV+A + + + + IVS FGT
Sbjct: 19 LPVQAIMNCADNSGAKNLYIVSVFGT 44
>SPAC15E1.06 |vps29||retromer complex subunit
Vps29|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 126 FGGCHRYAAYK 158
FGG H++AAY+
Sbjct: 113 FGGTHKFAAYE 123
>SPAC3G9.03 |rpl2301|rpl23-1|60S ribosomal protein
L23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 173 LPVEAFVRGVSVATTETIIIVSTFGT 96
LPV+A + + + + IVS FGT
Sbjct: 19 LPVQAIMNCADNSGAKNLYIVSVFGT 44
>SPAC630.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 22.6 bits (46), Expect = 8.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 42 QKEEESGNVPXIDILWIKGTECGNY 116
Q E + G+ I I WI+ T C +Y
Sbjct: 73 QAEGKGGDSSKILIKWIRTTPCFSY 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,075,497
Number of Sequences: 5004
Number of extensions: 19411
Number of successful extensions: 66
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 47431474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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