Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F21
(252 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0519 + 3758919-3759090,3759673-3759833,3760633-3760666,376... 44 2e-05
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 30 0.22
01_03_0309 - 14886764-14888004,14888237-14888300 28 1.2
04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029 27 1.6
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 27 1.6
02_05_0045 - 25393185-25394431,25394837-25395166,25395450-25396386 27 1.6
02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504 27 1.6
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 27 1.6
01_03_0304 - 14838977-14838988,14839291-14840302,14840414-148406... 27 1.6
07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706... 27 2.8
05_03_0483 + 14585581-14587977 27 2.8
12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761... 26 4.8
12_01_0331 + 2561837-2562430 26 4.8
07_03_0766 - 21354494-21354772,21355094-21355247,21355340-213555... 26 4.8
02_05_0523 - 29755007-29755856,29756381-29756940,29757058-297572... 26 4.8
12_02_0879 + 23960084-23961551,23961796-23962184 25 8.4
09_03_0123 - 12512116-12512442,12512742-12512846,12512928-125130... 25 8.4
08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527... 25 8.4
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 25 8.4
07_03_1536 - 27537394-27537576,27537837-27538073,27538164-275390... 25 8.4
06_01_1141 - 9503233-9503387,9503444-9503547,9504204-9504316 25 8.4
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 25 8.4
03_01_0203 - 1610124-1610154,1610244-1610419,1610490-1611124,161... 25 8.4
02_05_0039 + 25335690-25335883,25335984-25336131,25337292-253373... 25 8.4
>06_01_0519 +
3758919-3759090,3759673-3759833,3760633-3760666,
3760767-3760860,3761305-3761308
Length = 154
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/71 (40%), Positives = 37/71 (52%)
Frame = +3
Query: 6 DEQKVQSLMDTIQKEEESGNVPXIDILWIKGTECGNYYYSFGGCHRYAAYKRLNRQTIPG 185
D KVQ LMD+I+ ID+L + G YY F GCHRY A++RL TI
Sbjct: 94 DPAKVQELMDSIRVIGLQ-----IDVLEVDGV-----YYGFSGCHRYEAHQRLGLPTIRC 143
Query: 186 KLIRSTVTDLK 218
K+ R T L+
Sbjct: 144 KVRRGTKETLR 154
>03_06_0621 -
35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 30.3 bits (65), Expect = 0.22
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R +S+ T + IV TFG DPEY Y +T
Sbjct: 749 RSISIDQTRVVTIVQGTFGYLDPEYFYTSQLT 780
>01_03_0309 - 14886764-14888004,14888237-14888300
Length = 434
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R +S+ T + IV TFG DPEY + +T
Sbjct: 246 RSISIDETHVVTIVQGTFGYLDPEYYHTGQLT 277
>04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029
Length = 677
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R +S+ T + I+ T+G DPEY Y +T
Sbjct: 501 RSISIDETGILTIIQGTYGYLDPEYYYSSRLT 532
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R +S+ T + IV TFG DPEY + +T
Sbjct: 481 RSISIDETRVVTIVQGTFGYLDPEYFHTCQLT 512
>02_05_0045 - 25393185-25394431,25394837-25395166,25395450-25396386
Length = 837
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R VS+ T + IV TFG DPEY + +T
Sbjct: 646 RSVSLDETHVVTIVQGTFGYLDPEYYHTGQLT 677
>02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504
Length = 681
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R VS+ T + IV TFG DPEY + +T
Sbjct: 490 RSVSLDETHVVTIVQGTFGYLDPEYYHTGQLT 521
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYIT 60
R VS+ T + IV TFG DPEY + +T
Sbjct: 698 RSVSLDETHVVTIVQGTFGYLDPEYYHTGQLT 729
>01_03_0304 -
14838977-14838988,14839291-14840302,14840414-14840609,
14840795-14841149
Length = 524
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVY 75
R VS+ T + IV TFG DPEY +
Sbjct: 384 RSVSIDETHVVTIVQGTFGYLDPEYYH 410
>07_03_0636 +
20168180-20168462,20168961-20170303,20170401-20170678,
20170790-20170821,20170908-20171314,20171401-20171847
Length = 929
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 6 DEQKVQSLMDTIQKEEESGNVPXIDILWIKGTEC 107
D + L I E+GN+ I W+ GTEC
Sbjct: 786 DSPLAEDLSTAILTLSENGNLQRIHDEWLTGTEC 819
>05_03_0483 + 14585581-14587977
Length = 798
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 137 ATTETIIIVSTFGTFDPEYVYGRYIT 60
AT + ++ TFG FDPEY + +T
Sbjct: 620 ATHVSTVVKGTFGYFDPEYFRLKQLT 645
>12_01_0825 -
7611594-7611728,7612061-7612276,7612505-7612589,
7613170-7613372,7613935-7615723,7616322-7616450,
7616825-7616928,7618725-7618779,7618860-7618975
Length = 943
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 79 TYSGSKVPNVETIIIVSVVATDTPRTNASTGRRYPVNSSDPPSQISKT 222
TY S +V +I S V TD P N S + V+ ++ +Q S +
Sbjct: 419 TYGQSPQMSVPPSLICSNVMTDVPSDNRSEPKEMTVSQAEMVTQSSSS 466
>12_01_0331 + 2561837-2562430
Length = 197
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 206 DGGSDEFTGYRLPVEAFVRGVSVATTETIIIVSTF 102
DGG LPV + R V V + + ++VS++
Sbjct: 99 DGGDALLANCLLPVSSVSRAVPVTASSSFVVVSSY 133
>07_03_0766 -
21354494-21354772,21355094-21355247,21355340-21355577,
21355659-21355866,21356148-21356275,21356384-21356521,
21357234-21358080
Length = 663
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -2
Query: 116 IVSTFGTFDPEYV-YGRYIT 60
IV TFG PEYV +G+Y T
Sbjct: 516 IVGTFGYMSPEYVTHGQYST 535
>02_05_0523 -
29755007-29755856,29756381-29756940,29757058-29757275,
29757941-29758067
Length = 584
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 131 TETIIIVSTFGTFDPEYVYGRYITGLFF 48
T T+ I S G F + +GRYIT F
Sbjct: 82 TGTVYIFSLIGAFMSDSYWGRYITCAIF 109
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 118 IIVSVVATDTPRTNASTGRRYPVNS 192
++ V+ TP ++ ST +PVNS
Sbjct: 5 VVKEVIIVSTPESSKSTSGDFPVNS 29
>09_03_0123 -
12512116-12512442,12512742-12512846,12512928-12513091,
12513282-12513480,12514368-12514585,12514674-12514743
Length = 360
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 125 TIIIVSTFGTFDPEYVYGRYITGLFFLLNSVH 30
T ++ TFG FDPEY +TG L + V+
Sbjct: 236 TTRVLGTFGYFDPEYA----LTGKLTLQSDVY 263
>08_02_0279 -
15249361-15249612,15251270-15251506,15252704-15252772,
15252845-15252895,15254009-15254056,15254187-15254267,
15256219-15256257,15256486-15256551,15258113-15258236,
15258576-15258696,15258771-15258900,15259692-15259853
Length = 459
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 98 YRMWKLLL*FRWL-PQIRRVQTPQPADDTR*THQIHRHRSQ 217
Y WK RW P +RR+Q P P +DT + + R R +
Sbjct: 195 YNYWKSKR-ERWQKPILRRLQPPPPVNDTN-PYNVFRPREK 233
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 220 SLRSVTVDLMSLPGIVCRLRRLYAAYLW 137
SLR V +D+ PG++ +L L YLW
Sbjct: 661 SLR-VDIDVRVSPGVIEKLTSLQELYLW 687
>07_03_1536 -
27537394-27537576,27537837-27538073,27538164-27539078,
27540028-27540282,27540872-27540940,27542743-27542805,
27542833-27542901,27542962-27542997
Length = 608
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 139 TDTPRTNASTGRRYPVNSSD 198
+D+PR ++ +G R+P+ S+D
Sbjct: 11 SDSPRIDSGSGLRHPLTSAD 30
>06_01_1141 - 9503233-9503387,9503444-9503547,9504204-9504316
Length = 123
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 203 GGSDEFTGYRLPVEAFVRGVSVATTETIIIVSTFGTFDPEYV 78
GG E G R+P EA++ T E+++ VST T P V
Sbjct: 51 GGIGEL-GSRMPTEAWLELSQPTTCESLLSVSTGRTQAPYMV 91
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 69 PXIDILWIKGTECGNYYYSFGGCHRYAAYKRLNRQTIPGKLIRSTVTDLKDL 224
P + W+ G YY+++G AA+ + T+ G TV + DL
Sbjct: 1188 PDVGFDWVSGKGTPFYYFTYG-----AAFAEVEIDTLTGDFHTRTVDIVMDL 1234
>03_01_0203 -
1610124-1610154,1610244-1610419,1610490-1611124,
1611201-1611408
Length = 349
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 49 KKSPVMYRP*TYSGSKVPNVETIIIVSVVATDTPRTNA 162
K SP+ RP T S S +P + + VATD T+A
Sbjct: 30 KPSPLGLRPFTKSSSSLPLHLHAVSPATVATDGSSTSA 67
>02_05_0039 +
25335690-25335883,25335984-25336131,25337292-25337349,
25337652-25338116,25338435-25338575,25338694-25339934
Length = 748
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 152 RGVSVATTETIIIVS-TFGTFDPEYVYGRYITG 57
R + + T + +V TFG DPEY +TG
Sbjct: 559 RSIPLDQTHVVTMVQGTFGYLDPEYYNTSQLTG 591
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,228,442
Number of Sequences: 37544
Number of extensions: 129792
Number of successful extensions: 445
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 62
effective length of database: 12,465,620
effective search space used: 261778020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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