Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F20
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.6  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 10/40 (25%)
 Frame = -2

Query: 438 YHFQKPNYISYYPTHPTSANI----------FPIHFYSYL 349
           + +QKP Y  YYPT   S  +          FPI+ Y Y+
Sbjct: 285 FDWQKPFYPGYYPTMTYSNGLPFPQRPIWSNFPIYKYKYI 324


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 348 IDKSKNVWEIYWH 386
           + + KN++E++WH
Sbjct: 32  VTRQKNIYELFWH 44


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 10/40 (25%)
 Frame = -2

Query: 438 YHFQKPNYISYYPTHPTSANI----------FPIHFYSYL 349
           + +QKP Y  YYPT   S  +          FPI+ Y Y+
Sbjct: 285 FDWQKPFYPGYYPTMTYSNGLPFPQRPIWSNFPIYKYKYI 324


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 348 IDKSKNVWEIYWH 386
           + + KN++E++WH
Sbjct: 32  VTRQKNIYELFWH 44


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 85  WQIYRGLGSIIFPLFLQFKCTQK 153
           +QIY  LGS   PLF+  +   K
Sbjct: 202 YQIYATLGSFYIPLFVMIQVYYK 224


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -1

Query: 448 ELVIPFSEAQLYIILPHSSNEC----QYISHT 365
           +L +  S A  ++I PH + EC    + +SHT
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHT 187


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 421 QLYIILPHSSNECQYISHTFLLLSMGAALPHF 326
           Q+YI L   S+        FL+L +GA  P F
Sbjct: 301 QVYIQLKRPSDGATSEPFPFLMLPLGAGRPAF 332


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 275 YNCVIKQWTILCFSYVYG 222
           Y   I  WT +C ++V+G
Sbjct: 300 YTKAIDIWTGVCLTFVFG 317


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 275 YNCVIKQWTILCFSYVYG 222
           Y   I  WT +C ++V+G
Sbjct: 300 YTKAIDIWTGVCLTFVFG 317


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 537 KPLLLYSCRGR 505
           KP+  Y+CRGR
Sbjct: 46  KPIPSYACRGR 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,061
Number of Sequences: 438
Number of extensions: 3674
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)