Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F18
         (570 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)                     35   0.041
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.16 
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)                 32   0.38 
SB_47102| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)                     30   1.5  
SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)                   29   2.0  
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.0  
SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72)                    29   3.5  
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)                   28   4.7  
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_56395| Best HMM Match : MACPF (HMM E-Value=0.00093)                 28   6.2  
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)              28   6.2  
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)           27   8.2  
SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008)                  27   8.2  
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)                  27   8.2  
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)                      27   8.2  
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)                      27   8.2  

>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 968

 Score = 35.1 bits (77), Expect = 0.041
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +3

Query: 426 FSYIGVGVLIHPQVVITAAHIVXNYKDFPTTINVRAG 536
           F + G G LIHPQ V+TA H V + +  PT +N+R G
Sbjct: 687 FPFCG-GSLIHPQWVLTATHCVSSRR--PTDLNIRLG 720


>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXNYKDFPTTINVRAG 536
           G L+HPQ VITAAH V  Y+  P    +R G
Sbjct: 168 GTLVHPQWVITAAHCV--YRRGPNDFKIRMG 196


>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
          Length = 153

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +3

Query: 426 FSYIGVGVLIHPQVVITAAHIVXNYKDFPTTINVRAG 536
           F + G G L+HP+ V+TA+H +   K  P+++ +R G
Sbjct: 47  FPFCG-GTLVHPRFVVTASHCID--KKTPSSLRIRLG 80


>SB_47102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 303

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 414 NGRNFSYIGVGVLIHPQVVITAAHIVXNYKDFPTTINVRAGEWDTKIQ 557
           +GR FS I +  L+H +V++T         DF   I+ R   +  KIQ
Sbjct: 232 SGREFSIIVITALLHREVMLTKLVTNCERVDFACDISARLPTYTVKIQ 279


>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 636

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 411 MNGRNFSYIGVGVLIHPQVVITAAHIVXNYKD 506
           +N  N  + G G L+ PQ V+TAAH V + KD
Sbjct: 369 INYNNGHHCG-GTLVSPQWVVTAAHCVDHVKD 399


>SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 975

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +2

Query: 176 FDLRKLGVSPELGLQMRDEVSTSKPPRFTLDLHVNNHEKKYHLHAYNTPEHGHFASGVTV 355
           F L+ LGV P   L+M + + T      T DL V +  ++ + HAY +     F +  T 
Sbjct: 691 FTLQTLGVEPTGDLEMIEAIRTEVHRLCTRDLVVAHILEEDNAHAYTSDYKRLFTTSETE 750

Query: 356 RLPSR 370
             P R
Sbjct: 751 PTPER 755


>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
          Length = 1624

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -1

Query: 345  PEAKWPCSGVL*AWRWYFFSWLLTCRSRVNRGGLDVDTSSRICSPSSGETPSLRRSNPML 166
            PE  W C   L  WR   F   ++C SR  RG       +R C+P+   +  LR + P  
Sbjct: 1169 PEGSWQCGTELTEWRKRHF---VSCSSRWPRGRAS-RRDARACAPTM-PSARLRHTQPRK 1223

Query: 165  TRLTIT 148
              L ++
Sbjct: 1224 PTLLVS 1229


>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXNYKDFPTTINVRAGEWD 545
           G L+ P+ VITAAH V +    P +I VR G  D
Sbjct: 659 GTLVTPEWVITAAHCVVDKN--PASIQVRLGAQD 690


>SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72)
          Length = 1041

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +2

Query: 230 EVSTSKPPRFTLDLHVNNHEKKYHLHAYNTPEHGHFASGVTVRLPSRLLALEYTLNYPTD 409
           +V T+  P+ T     N+HEK++    Y       F SG+  +   R   L  +L   +D
Sbjct: 224 DVLTNSVPQKTDASSNNHHEKQHLAGHYRYFSSRQFTSGIRTQSSQRTHGLYLSL---SD 280

Query: 410 XERPELFLH 436
            +R ++F+H
Sbjct: 281 QDRIKIFIH 289


>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6500

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 86   EEKKQCAHAEIQSKID-MSSPGVIVNLVNIGFDLRKLGVSPELGLQMRDEVSTSKPPRFT 262
            ++K     A I+SK D ++S GV +  + +G ++    V P  G     EVS + PP   
Sbjct: 4346 DQKPTTDEASIRSKSDELNSMGVKIIPLLVGSEIGPQDVKPVSGDTKNIEVSVTDPPDHV 4405

Query: 263  LD 268
             D
Sbjct: 4406 TD 4407


>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
          Length = 386

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 426 FSYIGVGVLIHPQVVITAAHIV 491
           F Y G G LIHPQ ++TA H V
Sbjct: 77  FPYCG-GSLIHPQWILTATHCV 97


>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2644

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXNYK 503
           GVL+ P+ V+TAAH V N K
Sbjct: 126 GVLVGPKHVLTAAHCVANEK 145


>SB_56395| Best HMM Match : MACPF (HMM E-Value=0.00093)
          Length = 385

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 276 TCRSRVNR---GGLDVDTSSRICSPSSGETPSLRRSNPMLTRLTITPGLD 136
           +C+S  N    GG+   T     SPSS    SL + NP+    T TPG +
Sbjct: 210 SCQSPTNNYTFGGV-YQTCQTDGSPSSDPCASLAQKNPLTADYTCTPGYE 258


>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
          Length = 1019

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 426 FSYIGVGVLIHPQVVITAAHIVXNYKDFPTTINVRAG 536
           F Y G G LIH   V+TAAH + + +  P  + VR G
Sbjct: 414 FPYCG-GSLIHSNWVLTAAHCISSKR--PAEVVVRLG 447


>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
          Length = 506

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXN 497
           G LIHP+ V+TAAH + N
Sbjct: 288 GSLIHPEWVLTAAHCLEN 305


>SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008)
          Length = 700

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 218 QMRDEVSTSKPPRFTLDLHVNNHEKKYHLHAYNTPEHGHFASGV 349
           +   E+    P +    +++NN EKK   H+ N+ E   +  GV
Sbjct: 220 EKESEIEKKNPNKKKAPMYINNKEKKEITHSGNSEEVKKYNEGV 263


>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
          Length = 687

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXNYKDFPTTINVRAG 536
           G LI  + VITAAH V  Y  FP    V AG
Sbjct: 504 GALISSKWVITAAHCVIEY-PFPQVYEVIAG 533


>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 285

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 432 YIGVGVLIHPQVVITAAHIVXNY-KDFPTTINVRAGEWDTKI 554
           Y G G L+H + V+T AH    Y  + P   NV  GE++  +
Sbjct: 53  YCG-GALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEYNLAV 93


>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 530

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 444 GVLIHPQVVITAAHIVXN 497
           G LIHP+ V+TAAH + N
Sbjct: 248 GSLIHPEWVLTAAHCLEN 265


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,846,904
Number of Sequences: 59808
Number of extensions: 349751
Number of successful extensions: 956
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)