Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F18
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     25   0.53 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.8  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   4.9  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   8.6  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 420 RNFSYIGVGVLIHPQVVITAAHIVXNYKDFPTTINVRAGEWD 545
           + F Y+   + I PQ  +T + +  NY +   ++N   GE +
Sbjct: 461 QQFPYVHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEME 502


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 281 NHEKKYHLHAYNTPEHGH 334
           +H  +YH H  ++P H H
Sbjct: 321 HHPSQYHPHRGSSPHHQH 338


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 450 LIHPQVVITAAHIVXNYKDFPTTINVRAGEWDTKIQ 557
           +I  + V+TAAH + +       I V   +W +K +
Sbjct: 192 IISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTE 227


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 209 VQGKHRACVGRTQC*PG 159
           ++ K + CV R++C PG
Sbjct: 78  LRNKKKVCVPRSKCLPG 94


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 119 VFQRGRIASSLHSRHKSSCIR 57
           + QR R+AS +H +    C++
Sbjct: 170 ICQRERVASVVHRQETVDCLK 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,841
Number of Sequences: 438
Number of extensions: 3383
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)