Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F17
         (174 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c re...    30   1.2  
D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.         30   1.2  
BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c ...    30   1.2  
BC039706-1|AAH39706.2|  294|Homo sapiens ESF1 protein protein.         28   4.7  
AY358755-1|AAQ89115.1|  159|Homo sapiens GRPR5811 protein.             27   8.2  

>L16842-1|AAA20046.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core I protein protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 47  PWLSAQASVTSRNPRRFASPDVRHRD 124
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


>D26485-1|BAA05495.1|  480|Homo sapiens core I protein protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 47  PWLSAQASVTSRNPRRFASPDVRHRD 124
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


>BC009586-1|AAH09586.1|  480|Homo sapiens ubiquinol-cytochrome c
           reductase core protein I protein.
          Length = 480

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 47  PWLSAQASVTSRNPRRFASPDVRHRD 124
           PW  A+ +V +  P RF   ++RHRD
Sbjct: 254 PWTYAEDAVPTLTPCRFTGSEIRHRD 279


>BC039706-1|AAH39706.2|  294|Homo sapiens ESF1 protein protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 131 DGSHDDEHLERQTAEGSER*QK 66
           DGS DDE  E +  EG E+ QK
Sbjct: 270 DGSEDDEEQEEEEKEGKEKTQK 291


>AY358755-1|AAQ89115.1|  159|Homo sapiens GRPR5811 protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -3

Query: 100 GKPPRVPRGNRSLCGKPRRLLYH 32
           G  P VP G+  LCG+PR LLYH
Sbjct: 57  GPGPSVP-GH--LCGRPRALLYH 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,319,464
Number of Sequences: 237096
Number of extensions: 375723
Number of successful extensions: 1041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 76,859,062
effective HSP length: 37
effective length of database: 68,086,510
effective search space used: 1361730200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)