Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F17
         (174 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   0.26 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   0.26 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   0.26 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   0.26 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   0.59 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   0.59 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   1.8  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              19   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   4.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   4.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   5.5  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    19   5.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    18   9.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    18   9.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    18   9.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    18   9.6  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 145 TIPVLTGVTMTNIWRG 98
           T+PV++ +T  N+W G
Sbjct: 353 TLPVVSNLTAMNVWDG 368


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 145 TIPVLTGVTMTNIWRG 98
           T+PV++ +T  N+W G
Sbjct: 322 TLPVVSNLTAMNVWDG 337


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 145 TIPVLTGVTMTNIWRG 98
           T+PV++ +T  N+W G
Sbjct: 373 TLPVVSNLTAMNVWDG 388


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 145 TIPVLTGVTMTNIWRG 98
           T+PV++ +T  N+W G
Sbjct: 322 TLPVVSNLTAMNVWDG 337


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   TGFKSIESWWYKSRL-GFPHRXXXXXXXXXXXXXQMFVIVTPVKT 137
           T   S + + Y  R+ GFP R             Q+F+ V+PV +
Sbjct: 583 TSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSS 627


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   TGFKSIESWWYKSRL-GFPHRXXXXXXXXXXXXXQMFVIVTPVKT 137
           T   S + + Y  R+ GFP R             Q+F+ V+PV +
Sbjct: 583 TSLNSDKPFTYNERIFGFPGRLLLPRGKKEGMPFQLFLYVSPVSS 627


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 56  SAQASVTSRNPRRFA-SPDVRHRDSRQDRYGFTIN 157
           S  ++ +SRN  R A SP V   D   D  G+T N
Sbjct: 183 STSSTASSRNSDRSAGSPSVSESD-EVDVIGYTSN 216


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 55 KPRRLLYHQLSMLLKPVP 2
          +PRR  +H+   L  PVP
Sbjct: 42 EPRRRKFHKPITLTIPVP 59


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/40 (20%), Positives = 21/40 (52%)
 Frame = +2

Query: 50   WLSAQASVTSRNPRRFASPDVRHRDSRQDRYGFTIN*ICL 169
            W S       + P + +  + ++ +++++RY  TI+ + L
Sbjct: 1635 WRSRYLGDRMQRPMKESQENQQNAETQRERYYATIHKVAL 1674


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/40 (20%), Positives = 21/40 (52%)
 Frame = +2

Query: 50   WLSAQASVTSRNPRRFASPDVRHRDSRQDRYGFTIN*ICL 169
            W S       + P + +  + ++ +++++RY  TI+ + L
Sbjct: 1631 WRSRYLGDRMQRPMKESQENQQNAETQRERYYATIHKVAL 1670


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 85  VPRGNRSLCG 56
           VP GN + CG
Sbjct: 194 VPEGNMTACG 203


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
          rhodopsin protein.
          Length = 154

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 85 VPRGNRSLCG 56
          VP GN + CG
Sbjct: 70 VPEGNMTACG 79


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 129 VKTGMVLPSIE 161
           V T +VLPSIE
Sbjct: 35  VDTVLVLPSIE 45


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 129 VKTGMVLPSIE 161
           V T +VLPSIE
Sbjct: 35  VDTVLVLPSIE 45


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 129 VKTGMVLPSIE 161
           V T +VLPSIE
Sbjct: 35  VDTVLVLPSIE 45


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 105 QMFVIVTPVKTGMVLPSIEYV 167
           Q+  +   ++TG+  PSI  +
Sbjct: 36  QILGVSKQIETGLAFPSITLI 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,419
Number of Sequences: 438
Number of extensions: 591
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)