BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F16
(629 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 26 0.35
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 1.4
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 2.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 2.4
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 2.4
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 2.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.9
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.8 bits (54), Expect = 0.35
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 DIYVNMFLLCL*IGNIPSV-FSYFSEPRSLAIQ*YFFTQRTYDSNQW 498
D+ + F +C PS+ F+ R + + YFFTQRT +N W
Sbjct: 449 DVVGDYFFIC------PSIHFAQLFADRGMKVYYYFFTQRT-STNLW 488
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 361 DIYVNMFLLCL*IGNIPSV-FSYFSEPRSLAIQ*YFFTQRT 480
D+ + F +C PS+ F+ R + + YFFTQRT
Sbjct: 449 DVVGDYFFIC------PSIHFAQLFADRGMKVYYYFFTQRT 483
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/65 (20%), Positives = 26/65 (40%)
Frame = +2
Query: 434 NRVPSRYNNTSSPNVLMTLISXXXXXXXXXXXXQFSTL*FQFIISIGPNCEILAAPLSYA 613
N++P N TS+ ++ + +STL +I + P E + +S
Sbjct: 71 NKIPEGANTTSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 130
Query: 614 TGSNL 628
S++
Sbjct: 131 ADSDV 135
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/65 (20%), Positives = 26/65 (40%)
Frame = +2
Query: 434 NRVPSRYNNTSSPNVLMTLISXXXXXXXXXXXXQFSTL*FQFIISIGPNCEILAAPLSYA 613
N++P N TS+ ++ + +STL +I + P E + +S
Sbjct: 119 NKIPEGANTTSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178
Query: 614 TGSNL 628
S++
Sbjct: 179 ADSDV 183
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/65 (20%), Positives = 26/65 (40%)
Frame = +2
Query: 434 NRVPSRYNNTSSPNVLMTLISXXXXXXXXXXXXQFSTL*FQFIISIGPNCEILAAPLSYA 613
N++P N TS+ ++ + +STL +I + P E + +S
Sbjct: 119 NKIPEGANTTSTTKIIDGHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178
Query: 614 TGSNL 628
S++
Sbjct: 179 ADSDV 183
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/65 (20%), Positives = 26/65 (40%)
Frame = +2
Query: 434 NRVPSRYNNTSSPNVLMTLISXXXXXXXXXXXXQFSTL*FQFIISIGPNCEILAAPLSYA 613
N++P N TS+ ++ + +STL +I + P E + +S
Sbjct: 119 NKIPEGANTTSTTKIIDGHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSE 178
Query: 614 TGSNL 628
S++
Sbjct: 179 ADSDV 183
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 297 LNPGTPTTEYNIFLFINFNKNRIW*NNCKQYVV 199
LN TE+ L +N K+ CK+Y +
Sbjct: 180 LNKTNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 336 KQRLHPVTSRQLSLNPGTPTTEYNIFLFINFNKNRIW*NNCKQ 208
K+R T R+ S P ++ N + N N + NNCK+
Sbjct: 64 KERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNCKK 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,491
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -