Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F12
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   0.58 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 DGRT-NVPLISIKQESDKNSDARFAAVEIKSFAEVEQTVKT 310
           DG++ +VP+IS+K E++     +   +++  + E +QT ++
Sbjct: 214 DGKSEDVPVISLKNENELPQQHKTNVMDVMQWWEQQQTPRS 254


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 323 CGDKEHAFLAIKEIDDNYYVVYSAPFTPNGLTLIVLNAR 439
           C D E  F  + + D    +V      PN  TLI +  +
Sbjct: 381 CTDVEQKFFQVSKFDKRSKLVSILEKAPNERTLIFVETK 419


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 531 GNPRNTP*SVLPLKFGM 481
           G P+ TP S+LP + G+
Sbjct: 249 GRPKMTPQSLLPSQTGL 265


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 335 EHAFLAIKEIDDNYYVVYSAPFTPNG 412
           E  FLA +E    YY +Y      NG
Sbjct: 53  EQLFLAERERGLKYYPIYKLDVCGNG 78


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 143 CDWFTVTKVSEVHCTCDGRTNVPL 214
           C+  +V+     +C C    N+PL
Sbjct: 490 CNESSVSNCENEYCECTHVVNIPL 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,217
Number of Sequences: 336
Number of extensions: 2638
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)