Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F12
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.67 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   8.2  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 183 QWTSLTLVTVNQSQPVPSSV 124
           QW  +T VTV + + VPSS+
Sbjct: 75  QWRGMTFVTVPRYKGVPSSL 94


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 219 EINGTLVLPSQV-QWTSLTLVTVNQSQPVPSSV 124
           E + T   P  V +W   T VT+ ++  VPSS+
Sbjct: 64  EFDHTKNYPFDVDRWRDKTFVTIERNNGVPSSL 96


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 183 QWTSLTLVTVNQSQPVPSSV 124
           +W   T VT+ ++  VPSS+
Sbjct: 72  RWNGKTFVTILRNDGVPSSL 91


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 531 GNPRNTP*SVLPLKFGM 481
           G P+ TP S+LP + G+
Sbjct: 253 GRPKMTPQSLLPSQTGL 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,404
Number of Sequences: 438
Number of extensions: 3444
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)