Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_F08
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 29 2.9
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 29 2.9
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.8
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 116 bits (279), Expect = 1e-26
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = +3
Query: 174 LNGSPGYINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKENASVCMVS 353
LNGSPGYIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + A+ CMVS
Sbjct: 101 LNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVS 160
Query: 354 DL-LEALTP-LACAYARARGA 410
DL ++ P LA AYARARGA
Sbjct: 161 DLPIDTKKPSLAAAYARARGA 181
Score = 112 bits (269), Expect = 2e-25
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +1
Query: 406 GPNALTSSGDFVALSDACDEATARIISREVFDGIVAPGYTPEALNILRKKKGGNYCVLQM 585
G + ++S GDF+ALS+ CDE TA+II+REV DG+VAP + P AL++L KKK GNYCVL++
Sbjct: 180 GADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKI 239
Query: 586 DPSYEPDLTERKTLYGLSLEQRRND 660
+P+Y P TE +T++GL L Q+RN+
Sbjct: 240 NPNYLPSETEERTVFGLRLRQKRNN 264
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +2
Query: 5 GPQGFTHTSEYDLAISDYFRRQYSA-GQSQLTLRYGMNPHQK-PAQVFTTRDRLPL 166
G + F HT+ YD +IS + RR+++ G+ L LRYG NPHQK A+++ D +P+
Sbjct: 43 GNKAFEHTTSYDESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPI 98
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 116 bits (279), Expect = 1e-26
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = +3
Query: 174 LNGSPGYINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKENASVCMVS 353
LNGSPGYIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + A+ CMVS
Sbjct: 231 LNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVS 290
Query: 354 DL-LEALTP-LACAYARARGA 410
DL ++ P LA AYARARGA
Sbjct: 291 DLPIDTKKPSLAAAYARARGA 311
Score = 112 bits (269), Expect = 2e-25
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +1
Query: 406 GPNALTSSGDFVALSDACDEATARIISREVFDGIVAPGYTPEALNILRKKKGGNYCVLQM 585
G + ++S GDF+ALS+ CDE TA+II+REV DG+VAP + P AL++L KKK GNYCVL++
Sbjct: 310 GADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKI 369
Query: 586 DPSYEPDLTERKTLYGLSLEQRRND 660
+P+Y P TE +T++GL L Q+RN+
Sbjct: 370 NPNYLPSETEERTVFGLRLRQKRNN 394
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 QGFTHTSEYDLAISDYFRRQYSA-GQSQLTLRYGMNPHQK-PAQVFTTRDRLPL 166
+ F HT+ YD +IS + RR+++ G+ L LRYG NPHQK A+++ D +P+
Sbjct: 175 KAFEHTTSYDESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPI 228
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 112 bits (269), Expect = 2e-25
Identities = 56/79 (70%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +3
Query: 174 LNGSPGYINLCDALNAWQLVKELKEALGLPAAASFKHVSPAGAAVGLPLTKENASVCMVS 353
LNGSPGYIN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + A+ CMVS
Sbjct: 6 LNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVS 65
Query: 354 DL-LEALTP-LACAYARAR 404
DL ++ P LA AYARAR
Sbjct: 66 DLPIDTKKPSLAAAYARAR 84
Score = 112 bits (269), Expect = 2e-25
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +1
Query: 406 GPNALTSSGDFVALSDACDEATARIISREVFDGIVAPGYTPEALNILRKKKGGNYCVLQM 585
G + ++S GDF+ALS+ CDE TA+II+REV DG+VAP + P AL++L KKK GNYCVL++
Sbjct: 102 GADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKI 161
Query: 586 DPSYEPDLTERKTLYGLSLEQRRND 660
+P+Y P TE +T++GL L Q+RN+
Sbjct: 162 NPNYLPSETEERTVFGLRLRQKRNN 186
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 182 TVQCWSMANGREL*TLGPVSDEDSYHI*VSIV-IDPRSIVYGNS----QIWRGHTRRCV* 18
T++ W + +GR L TL +H V V D ++V G +IW HT RC+
Sbjct: 357 TLRVWDVESGRHLATL------HGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIR 410
Query: 17 SLEG 6
+L G
Sbjct: 411 TLTG 414
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 182 TVQCWSMANGREL*TLGPVSDEDSYHI*VSIV-IDPRSIVYGNS----QIWRGHTRRCV* 18
T++ W + +GR L TL +H V V D ++V G +IW HT RC+
Sbjct: 359 TLRVWDVESGRHLATL------HGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 17 SLEG 6
+L G
Sbjct: 413 TLTG 416
>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
protein K10E9.1 protein.
Length = 1451
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Frame = +1
Query: 535 LNILRKKKGGNY--CVLQMDPSYEP-----DLTERKTLYGLSLEQRRN 657
+NI + G Y C++ + SY+ DL E+K L L L+QRRN
Sbjct: 924 MNISKSMTQGEYATCIMMLLTSYDSSHFVADLIEKKQLGKLKLQQRRN 971
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 182 TVQCWSMANGREL*TLGPVSDEDSYHI*VSIV-IDPRSIVYGNS----QIWRGHTRRCV* 18
T++ W + +GR L TL +H V V D ++V G +IW HT RC+
Sbjct: 359 TLRVWDVESGRHLATL------HGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 17 SLEG 6
+L G
Sbjct: 413 TLTG 416
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Frame = -1
Query: 624 CLTLREVRLVTRVHL*NAIVAAFLFPQY-----VQSFG--CIPGGDD 505
CLT REV + + N I LFP Y V+SFG C PG D
Sbjct: 45 CLTDREVSNTKQARITNGIKDTSLFPGYEVSGIVESFGAECTPGDYD 91
>Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 268 RLVSNTCPPPEPPWDCL*LRKMRRCVWYRIYWK 366
RL CPPPE P + + VW + YW+
Sbjct: 416 RLTVKLCPPPEDP-NFTMCTAFSKSVWQKDYWQ 447
>Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 268 RLVSNTCPPPEPPWDCL*LRKMRRCVWYRIYWK 366
RL CPPPE P + + VW + YW+
Sbjct: 416 RLTVKLCPPPEDP-NFTMCTAFSKSVWQKDYWQ 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,480
Number of Sequences: 27780
Number of extensions: 276473
Number of successful extensions: 766
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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