Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F08
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   0.64 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.85 

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 490 EVFDGIVAPGYTPEALNILRKKKGGNYCVLQMDPSY 597
           + F  ++     P +LN++ +K G   C+LQ  P +
Sbjct: 79  KTFLAVIRYDGVPSSLNVISEKIGNGGCLLQPYPDW 114


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 18/66 (27%), Positives = 22/66 (33%)
 Frame = -1

Query: 372  SALPVNPIPYTPTHFP*SKAVPXXXXXXXXXXX*PRQVDPALPLTP*RAAKRSTRHTS*C 193
            SA    P+P  P   P     P             R   P  PL+  RA  R    T   
Sbjct: 1358 SASGGRPVPERPERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDS 1417

Query: 192  TRANRS 175
            T+ +RS
Sbjct: 1418 TKLDRS 1423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,884
Number of Sequences: 438
Number of extensions: 3631
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)