Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_F01
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g...    40   0.031
UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;...    34   1.6  
UniRef50_A5K7V3 Cluster: Putative uncharacterized protein; n=2; ...    32   8.3  
UniRef50_Q974D2 Cluster: Putative uncharacterized protein ST0720...    32   8.3  

>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
          Length = 268

 Score = 39.9 bits (89), Expect = 0.031
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +3

Query: 24  LRVQEYFIEHLSQNISSLKIQIALHTLYILKSLYLFNYNLFGKFMKKT 167
           L++    I +    IS +K  I+L+ +YI+K L +FNYNLF  F  KT
Sbjct: 78  LKLLNININNSFNTISKIKKNISLYYIYIIKILLIFNYNLFLLFFYKT 125


>UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;
            Plasmodium vivax|Rep: DNA repair endonuclease, putative -
            Plasmodium vivax
          Length = 1473

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 307  PPSRLGSNGILFIGDSVTGRLPSGKLLSGSFPTGRMLFGKFLTGKML 447
            PP+    NG    G+S+ G  P+G+ L+G  P G  L G  LTG+ L
Sbjct: 1039 PPNGESLNGGPPNGESLNGGPPNGESLNGGPPNGESLNGGHLTGESL 1085


>UniRef50_A5K7V3 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 741

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 346 GDSVTGRLPSGKLLSGSFPTGRMLFGKFLTGKMLS 450
           G+  TG  P+G+  +G  PTG+ L G+ LTG+ L+
Sbjct: 291 GEQPTGEHPAGEQPTGEQPTGQPLTGQPLTGQPLT 325


>UniRef50_Q974D2 Cluster: Putative uncharacterized protein ST0720;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST0720 - Sulfolobus tokodaii
          Length = 391

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 289 GG*VVLPPSRLGSNGILFIGDSVTG 363
           GG V LP  R+G NG+L+I  SV G
Sbjct: 354 GGFVDLPKGRIGKNGVLYINASVDG 378


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,458,883
Number of Sequences: 1657284
Number of extensions: 7523661
Number of successful extensions: 16823
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16744
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)