Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E22
(239 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 27 1.3
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 27 1.3
AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-... 27 1.3
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 26 3.1
AC024780-2|AAO25975.1| 275|Caenorhabditis elegans Serpentine re... 26 3.1
Z81049-2|CAB02847.2| 576|Caenorhabditis elegans Hypothetical pr... 25 5.4
AB030946-1|BAA90483.1| 576|Caenorhabditis elegans high-affinity... 25 5.4
Z93389-6|CAB07669.2| 300|Caenorhabditis elegans Hypothetical pr... 25 7.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 7.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 7.2
Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z71261-1|CAA95801.2| 437|Caenorhabditis elegans Hypothetical pr... 25 9.5
U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical pr... 25 9.5
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 25 9.5
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 25 9.5
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 25 9.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 25 9.5
AL031627-19|CAA20969.1| 349|Caenorhabditis elegans Hypothetical... 25 9.5
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 25 9.5
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 25 9.5
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 25 9.5
AC136145-1|AAN60521.2| 226|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 45 DEEAKVLRSDYSQSPE-GDFSYAYETEN 125
D E +++ YSQSPE G FS Y+ +N
Sbjct: 257 DFEYDIVKDKYSQSPENGLFSQVYDVKN 284
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 30 VYATSDEEAKV-LRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEI 179
+Y E + V + + Q P+G F+ + T+NG++ ++ S G++ I
Sbjct: 16 IYEGMREHSSVEIHGEVFQGPQGGFTVEFPTKNGVALHISVRMGSYGQNVI 66
>AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-11
protein.
Length = 232
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 30 VYATSDEEAKV-LRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEI 179
+Y E + V + + Q P+G F+ + T+NG++ ++ S G++ I
Sbjct: 16 IYEGMREHSSVEIHGEVFQGPQGGFTVEFPTKNGVALHISVRMGSYGQNVI 66
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 218 GRFVLAGPRNFE--SYFILAKRFYFSLGLATDAILCLVCI 105
GR + NF S+F + + + F LG T++ LC +C+
Sbjct: 2 GREQVMETNNFHVASFFSMIQIYSFFLGFTTESNLCGICL 41
>AC024780-2|AAO25975.1| 275|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 48 protein.
Length = 275
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 122 LCLVCIAKITFWTL*IVAAKDFSFF 48
L +V I+ I WT IV +D+SFF
Sbjct: 44 LVIVIISWINSWTSRIVYTRDYSFF 68
>Z81049-2|CAB02847.2| 576|Caenorhabditis elegans Hypothetical
protein C48D1.3 protein.
Length = 576
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = -1
Query: 230 NLTFGRFVLAGPRNFESYFILAKRFYFSLGLATDAILCLVCIAKITFWTL*IVAAKDFSF 51
+L G + A E Y + F G ++ + + TFWT I++A +
Sbjct: 95 SLVMGGLLFAKKMREEGYITMLDPFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATL 154
Query: 50 FITGGINV 27
+ GI++
Sbjct: 155 SVILGIDM 162
>AB030946-1|BAA90483.1| 576|Caenorhabditis elegans high-affinity
choline transporterCHO-1 protein.
Length = 576
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = -1
Query: 230 NLTFGRFVLAGPRNFESYFILAKRFYFSLGLATDAILCLVCIAKITFWTL*IVAAKDFSF 51
+L G + A E Y + F G ++ + + TFWT I++A +
Sbjct: 95 SLVMGGLLFAKKMREEGYITMLDPFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATL 154
Query: 50 FITGGINV 27
+ GI++
Sbjct: 155 SVILGIDM 162
>Z93389-6|CAB07669.2| 300|Caenorhabditis elegans Hypothetical
protein T13F3.5 protein.
Length = 300
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 36 ATSDEEAKVLRSDYSQSPEGDF 101
AT E AKV +SDY+ +GDF
Sbjct: 257 ATPSEIAKVFKSDYTDD-DGDF 277
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 129 ISGQAQGKVKSLGKDEIALEVSGSSQYKSPEGEVVS 236
+SG K K DE++++ S K PE E V+
Sbjct: 10870 VSGGKSEKSKEKESDEMSIQQLNKSVKKKPENEAVT 10905
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 129 ISGQAQGKVKSLGKDEIALEVSGSSQYKSPEGEVVS 236
+SG K K DE++++ S K PE E V+
Sbjct: 10870 VSGGKSEKSKEKESDEMSIQQLNKSVKKKPENEAVT 10905
>Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical
protein T07G12.12 protein.
Length = 361
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 45 DEEAKVLRSDYSQSPEGDFSYAYETENGI 131
++E + L+ Y Q PE + + ++E+ N +
Sbjct: 90 NDENEDLKESYDQEPEEELNSSHESNNSV 118
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +3
Query: 3 IIAFCIIGYVYATSDEEAKVLRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEIA 182
IIA +IG A + + R + E + E SG+A G+ E +
Sbjct: 6 IIALLLIGASLAHPADPIRAKRDVSASEDEFSGDSSGEISGESSGEASGEASGEASGEAS 65
Query: 183 LEVSGSS 203
E SG S
Sbjct: 66 GEASGES 72
>Z71261-1|CAA95801.2| 437|Caenorhabditis elegans Hypothetical
protein F21C3.1 protein.
Length = 437
Score = 24.6 bits (51), Expect = 9.5
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 3 IIAFCIIG-YVYATSDEEAKVLRSDYSQSPEGDFSYAYETENGISGQAQGKV--KSLGKD 173
+ A C IG +++ + DYS +PEG F Y T +G A + SL K
Sbjct: 184 LAAHCFIGALIFSLFISITTIGYGDYSPTPEGLFQYIIVTVYLCTGVATMLLFFASLQKG 243
Query: 174 EIALEVSGSSQYKSPEGEV 230
+ + G S E E+
Sbjct: 244 IMWIHYYGRKVSDSEEAEI 262
>U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical
protein F16H11.1 protein.
Length = 501
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 170 LAKRFYFSLGLATDAILCLVCIAKITFWTL 81
L+K+ +S GLA+ + C V + + W +
Sbjct: 343 LSKKILYSFGLASGMLSCAVMMLDLPGWKI 372
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 45 DEEAKVLRSDYSQSP---EGDFSYAYETENGISGQAQGKVKSLGKDEIALEVSGSSQYKS 215
D+E K L D P G++ Y ++G +G D L S
Sbjct: 5870 DDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTDASGAVIGPDGSPLPTDDSGAVIG 5929
Query: 216 PEGEVV 233
P+GEV+
Sbjct: 5930 PDGEVI 5935
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 45 DEEAKVLRSDYSQSP---EGDFSYAYETENGISGQAQGKVKSLGKDEIALEVSGSSQYKS 215
D+E K L D P G++ Y ++G +G D L S
Sbjct: 5915 DDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTDASGAVIGPDGSPLPTDDSGAVIG 5974
Query: 216 PEGEVV 233
P+GEV+
Sbjct: 5975 PDGEVI 5980
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +3
Query: 3 IIAFCIIGYVYATSDEEAKVLRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEIA 182
IIA +IG A + + R + E + E SG+A G+ E +
Sbjct: 6 IIALLLIGASLAHPADPIRAKRDVSASEDEFSGDSSGEISGESSGEASGEASGEASGEAS 65
Query: 183 LEVSGSS 203
E SG S
Sbjct: 66 GEASGES 72
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 24.6 bits (51), Expect = 9.5
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 45 DEEAKVLRSDYSQSP---EGDFSYAYETENGISGQAQGKVKSLGKDEIALEVSGSSQYKS 215
D+E K L D P G++ Y ++G +G D L S
Sbjct: 5915 DDEGKPLGPDGQVLPTDASGNYIYPVHGQDGTPLPTDASGAVIGPDGSPLPTDDSGAVIG 5974
Query: 216 PEGEVV 233
P+GEV+
Sbjct: 5975 PDGEVI 5980
>AL031627-19|CAA20969.1| 349|Caenorhabditis elegans Hypothetical
protein Y102A5C.31 protein.
Length = 349
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 28 TFMPPVMKKLKSFAATIHRVQKVILAMHTRQRMASV 135
TF P ++ KL +H + ++ T RMASV
Sbjct: 13 TFAPYLLHKLAIVEIPLHVLASYVVIFKTPSRMASV 48
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 166 PRDFTFPWAWPLMPFSVSY 110
P D TF WA+P +P ++
Sbjct: 174 PSDETFTWAFPSIPLQTAH 192
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 166 PRDFTFPWAWPLMPFSVSY 110
P D TF WA+P +P ++
Sbjct: 174 PSDETFTWAFPSIPLQTAH 192
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 54 AKVLRSDYSQSPEGDFSYAYETENGISGQAQ-GKVKSLGKDEIALEVSGSSQYKSPEGE 227
AK+++ +Y + P E ++ I ++ GKV+ GK E + S YK EGE
Sbjct: 629 AKLVKLEYKELPA-----LVELKDAIVAKSLLGKVRHFGKSEYLVNESLVHSYKVLEGE 682
>AC136145-1|AAN60521.2| 226|Caenorhabditis elegans Hypothetical
protein E_BE45912.2 protein.
Length = 226
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 3 IIAFCIIGYVYATSDEEAKVLRSDYSQSPEGDFSY 107
I CIIG++ + + K+ +S YS+ F Y
Sbjct: 100 IFCQCIIGWLIGSIVNKTKIKKSKYSKEILSRFDY 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,573,119
Number of Sequences: 27780
Number of extensions: 99119
Number of successful extensions: 325
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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