Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E22
         (239 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    40   3e-06
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   3.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   4.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   4.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   4.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   6.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   6.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   8.5  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 40.3 bits (90), Expect = 3e-06
 Identities = 20/66 (30%), Positives = 37/66 (56%)
 Frame = +3

Query: 42  SDEEAKVLRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEIALEVSGSSQYKSPE 221
           +D++A +       + +G++   +ET NGIS Q  G+ K +  +E  +   GS  Y +P+
Sbjct: 23  ADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQV-DNETPVVSQGSDSYTAPD 81

Query: 222 GEVVSL 239
           G+ VS+
Sbjct: 82  GQQVSI 87


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 87  DSVNSRCEGL*LLHHWWH 34
           +SV++ C     LHHW H
Sbjct: 461 ESVDALCN---TLHHWHH 475


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 140 LATDAILCLVCIAKITFWT 84
           LA   I+C  CI K   WT
Sbjct: 213 LAVVWIMCYFCIWKGVKWT 231


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 140 LATDAILCLVCIAKITFWT 84
           LA   I+C  CI K   WT
Sbjct: 266 LAVVWIMCYFCIWKGVKWT 284


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 196 PETSRAISSLPRDFT 152
           PE +R    +PRD+T
Sbjct: 172 PEGARVPIEIPRDYT 186


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 149 SLGLATDAILCLVCIAK 99
           SLGL+T    C + +AK
Sbjct: 509 SLGLSTATSTCSLAVAK 525


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -3

Query: 207 IGWTQKLRELFHPCQEILLFLGPGH*CHSL 118
           +GW     EL H  +  L++  P    H L
Sbjct: 21  LGWNVPAEELIHIPEHWLVYPEPNPSLHYL 50


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 6.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 96  DFSYAYETENGISG 137
           +F Y+YE  N   G
Sbjct: 266 EFKYSYEISNAFRG 279


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
          RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 6/22 (27%), Positives = 11/22 (50%)
 Frame = -3

Query: 99 NHLLDSVNSRCEGL*LLHHWWH 34
          NH   S N+    + +++ W H
Sbjct: 24 NHQRKSANNLAHSMKVIYEWKH 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,944
Number of Sequences: 438
Number of extensions: 954
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)