Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E21
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   4.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   7.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 209  GPHFVPTTSTDISP 168
            GP  +P T+ DISP
Sbjct: 1683 GPDKIPETAEDISP 1696


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 209  GPHFVPTTSTDISP 168
            GP  +P T+ DISP
Sbjct: 1679 GPDKIPETAEDISP 1692


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -3

Query: 203 HFVPTTSTDISPPI--FLAAVSAFWVAGDNTSLLCSAKTNVLC 81
           H+    +T + P +   L  ++  W+   +T  + +A  N++C
Sbjct: 251 HYGILHATYVIPAVTMMLLTLTVLWLDSRSTERMIAASVNLIC 293


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 396 ATLGKIALPKAVAGAKIWVKLKLLLCSQ 313
           A  G+ +    V+G+KIW   +  +C Q
Sbjct: 52  ACRGRCSSYLQVSGSKIWQMERSCMCCQ 79


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 390 LGKIALPKAVAGAKIWVKLKLL 325
           LGK  L  A+AG++ ++ + LL
Sbjct: 661 LGKAYLMYAIAGSQCFINIWLL 682


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,049
Number of Sequences: 438
Number of extensions: 2002
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)