Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E19
(424 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 136 9e-33
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 120 4e-28
05_01_0573 - 5083030-5083151,5084639-5084738,5084790-5084829,508... 29 1.2
05_07_0165 + 28107093-28108457 28 3.6
01_02_0122 + 11348686-11348948,11350492-11350587,11351513-113515... 28 3.6
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 27 6.2
08_01_0342 - 3016705-3016884,3016963-3017031,3017322-3017408,301... 27 6.2
05_05_0226 + 23442971-23443857,23444209-23446324 27 6.2
02_04_0094 + 19664434-19665078 27 6.2
01_06_1416 - 37174913-37175006,37175299-37175441,37175932-371760... 27 6.2
09_02_0372 + 8070452-8071012,8071114-8071221 24 7.7
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 27 8.2
10_01_0316 + 3479574-3482679,3482766-3483127 27 8.2
09_03_0103 - 12383585-12384700 27 8.2
05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411 27 8.2
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 27 8.2
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 136 bits (328), Expect = 9e-33
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 8/127 (6%)
Frame = +1
Query: 1 ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLT--------EAEEAIINKK 156
ELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A E E A K
Sbjct: 90 ELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAK 149
Query: 157 RSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLR 336
+S +K RQ+ ++ +EEQF +GRLLAC++SRPGQCGRAD YILEGKELEFY++
Sbjct: 150 KSNHVVRKLEKRQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMK 209
Query: 337 KIXIXRG 357
K+ +G
Sbjct: 210 KLQRKKG 216
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 120 bits (290), Expect = 4e-28
Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 25/144 (17%)
Frame = +1
Query: 1 ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGA--------------------- 117
ELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A
Sbjct: 90 ELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEHALGKIRCLFIGL 149
Query: 118 ----KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCG 285
K +AE K+S +K RQ+ ++ +EEQF +GRLLAC++SRPGQCG
Sbjct: 150 YVMLKGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCG 209
Query: 286 RADXYILEGKELEFYLRKIXIXRG 357
RAD YILEGKELEFY++K+ +G
Sbjct: 210 RADGYILEGKELEFYMKKLQRKKG 233
>05_01_0573 -
5083030-5083151,5084639-5084738,5084790-5084829,
5085122-5085567
Length = 235
Score = 29.5 bits (63), Expect = 1.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 207 GRGWSGGAIPHWTAVS 254
G GW GG+ HW++VS
Sbjct: 65 GNGWQGGSTDHWSSVS 80
>05_07_0165 + 28107093-28108457
Length = 454
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 238 CGIAPPDHPLPWTGAACS 185
C +PPD+ LPW AA S
Sbjct: 248 CTYSPPDYGLPWADAAVS 265
>01_02_0122 +
11348686-11348948,11350492-11350587,11351513-11351524,
11354009-11354699
Length = 353
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 147 KQKTQSKDSEEVPEQAAPVQGRGWSGGAIPHWTAVS 254
K +T+ KD PE A G G GG I + +A S
Sbjct: 192 KTRTKEKDKAPAPEAAHNDDGGGGGGGGIDNVSAAS 227
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 208 VEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKI 342
V+G + HTG+ AC + G+ A Y G L YL K+
Sbjct: 63 VKGNPASKTHTGKWKACYSILGGEFCGALAYYAVGTNLVSYLTKV 107
>08_01_0342 -
3016705-3016884,3016963-3017031,3017322-3017408,
3017603-3017650,3017783-3017873,3018243-3018322,
3018429-3018533,3019457-3019551,3019710-3019788,
3020214-3020402
Length = 340
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -2
Query: 186 QVLLRC----LLTAFFVYDGFLSLSELGTFLPSEWQQVVAFIPL 67
Q+LL C LL F Y GFL L T + EWQ VV + L
Sbjct: 246 QLLLLCPVLFLLQGFEGYVGFLLLRTAHTGIVPEWQVVVCGVLL 289
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 136 EAIINKKRSQK-TAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 267
E ++NK SQ AK RL FH+G L CVAS
Sbjct: 521 EFLLNKSLSQIFIAKSSRDHPRLGVNTNACHLSFHSGELTECVAS 565
>02_04_0094 + 19664434-19665078
Length = 214
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 39 CRGGCHTFQAVV*KPLPAATRKEER 113
C GG T +AVV LPAA RK R
Sbjct: 107 CAGGGGTAKAVVIAGLPAAARKASR 131
>01_06_1416 -
37174913-37175006,37175299-37175441,37175932-37176027,
37177125-37177364,37177456-37177812,37178020-37178097,
37178387-37178434,37179406-37179675,37179954-37180054,
37180452-37180605
Length = 526
Score = 27.1 bits (57), Expect = 6.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -2
Query: 276 TGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSLSELGTFLPSE 97
+G R+TC + + L QT L + L + RC L+ Y +LS L + P E
Sbjct: 437 SGCVRYTCMRKKADNLRQQTLHQLRRILTTRQAARCFLSIGEYYRRLRALSNLWSSRPRE 496
>09_02_0372 + 8070452-8071012,8071114-8071221
Length = 222
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 211 EGGLEEQFHTGRLLACVASRP 273
E L+E+ H+G LL+CV P
Sbjct: 130 EEPLQEEKHSGHLLSCVELFP 150
Score = 21.4 bits (43), Expect(2) = 7.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 121 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQ 231
L E EE +++K ++LSR L + +EEQ
Sbjct: 71 LMEEEEIDEESLQAEKHPSRHLSRVDLFPLAAPMEEQ 107
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 91 LPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 267
L +K+ A+ + A INKK ++Y+S ++ G +Q++ G + C S
Sbjct: 337 LEKAKKELAESIQKGVAFINKKSYIVKRREYISSNQVGCCFHGRRKQYYLGSKVTCFGS 395
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = -2
Query: 306 QNVTIGATALTGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSL 127
Q + I L+GP H+ +E+L + L +P+Q L +++ V +S
Sbjct: 701 QGLNISNNRLSGPIPHSLGNLQKLEVLDLSNNSLSGPIPSQ--LSNMISLSVVN---ISF 755
Query: 126 SELGTFLPSEWQQVVAFIP 70
+EL LP W ++ +P
Sbjct: 756 NELSGQLPDGWDKIATRLP 774
>09_03_0103 - 12383585-12384700
Length = 371
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 147 YDGFLSLSELGTFLPSEWQQVVAFIPLPERCGIHHDNSILY 25
+D F E+ T W+Q+ +F P G+H + ++ Y
Sbjct: 173 FDSFNVCCEIFTIGDKSWRQIGSFHGAPTDRGVHVNGAVYY 213
>05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411
Length = 220
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 165 LTAFFVYDGFLSLSELGTFLP 103
L+ FFV+DGFL++ + F P
Sbjct: 200 LSCFFVFDGFLTVKKYHIFSP 220
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 135 GSHHKQKTQSKDSEEVPEQAAPVQGRGWS 221
G H K++ +++D EE E+ APV + S
Sbjct: 437 GGHKKKRRKNEDDEEEEERNAPVSRKSKS 465
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,438,506
Number of Sequences: 37544
Number of extensions: 271043
Number of successful extensions: 857
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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