Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E19
         (424 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8 prot...   188   7e-48
BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8 pr...   188   7e-48
AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8 pr...   188   7e-48
AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8 pr...   188   7e-48
AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8 pr...   188   7e-48
BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal pr...   112   4e-25
AF273047-1|AAG34907.1|  623|Homo sapiens CTCL tumor antigen se20...    29   6.5  
BC004102-1|AAH04102.1|  512|Homo sapiens ALDH3A1 protein protein.      29   8.5  

>X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  188 bits (458), Expect = 7e-48
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKK 180
           ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KK
Sbjct: 89  ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148

Query: 181 YLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKIXIXRG 357
           Y  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y+LEGKELEFYLRKI   +G
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKG 207


>BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  188 bits (458), Expect = 7e-48
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKK 180
           ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KK
Sbjct: 89  ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148

Query: 181 YLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKIXIXRG 357
           Y  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y+LEGKELEFYLRKI   +G
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKG 207


>AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8
           protein.
          Length = 188

 Score =  188 bits (458), Expect = 7e-48
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKK 180
           ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KK
Sbjct: 69  ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 128

Query: 181 YLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKIXIXRG 357
           Y  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y+LEGKELEFYLRKI   +G
Sbjct: 129 YDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKG 187


>AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  188 bits (458), Expect = 7e-48
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKK 180
           ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KK
Sbjct: 89  ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148

Query: 181 YLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKIXIXRG 357
           Y  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y+LEGKELEFYLRKI   +G
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKG 207


>AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  188 bits (458), Expect = 7e-48
 Identities = 86/119 (72%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   ELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKK 180
           ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KK
Sbjct: 89  ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148

Query: 181 YLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKELEFYLRKIXIXRG 357
           Y  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y+LEGKELEFYLRKI   +G
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKG 207


>BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal
           protein S8 protein.
          Length = 80

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = +1

Query: 121 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXY 300
           LT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRAD Y
Sbjct: 1   LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60

Query: 301 ILEGKELEFYLRKIXIXRG 357
           +LEGKELEFYLRKI   +G
Sbjct: 61  VLEGKELEFYLRKIKARKG 79


>AF273047-1|AAG34907.1|  623|Homo sapiens CTCL tumor antigen se20-7
           protein.
          Length = 623

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +1

Query: 145 INKKRSQKTAK-KYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADXYILEGKEL 321
           + K+ S+   K K L++   SK+E G +EQ  T ++L    +   Q         + KE+
Sbjct: 533 LEKQNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREG-----QKKEI 587

Query: 322 EFYLRKIXIXRGGKADMCNNIQEINFKKQKKKTK 423
           E   +K+   +     + N   E  FKK+KKK K
Sbjct: 588 EILTQKLS-AKEDSIHILNEEYETKFKKKKKKKK 620


>BC004102-1|AAH04102.1|  512|Homo sapiens ALDH3A1 protein protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 272 GRLATHANSRPVWNCSSRPPSTLDRRCLLRY 180
           GR A   N+ P+ +C SR PS  +R C  R+
Sbjct: 30  GREAGSLNTSPLGSCRSRSPSYRERLCQRRH 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.134    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,393,509
Number of Sequences: 237096
Number of extensions: 1487170
Number of successful extensions: 3676
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3676
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)