Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E16
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 31 0.42
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 3.0
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 29 3.0
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.2
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 28 5.2
U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome regu... 28 5.2
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 28 5.2
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 28 5.2
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 28 5.2
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 28 5.2
AC006757-1|AAF60544.1| 163|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 27 9.1
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 27 9.1
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 27 9.1
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 27 9.1
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 27 9.1
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 27 9.1
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 27 9.1
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 27 9.1
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 27 9.1
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 27 9.1
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical protein
T05H10.1 protein.
Length = 1326
Score = 31.5 bits (68), Expect = 0.42
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 206 IENIRQNDENSGSKITTK---LREMGDRLVATNEDIQRSLTQGNTLTERAYNDISRSYES 376
++ +R E G ++T K LRE+G V T + L +TL +R+YN S Y
Sbjct: 1108 LQCLRMYKEVYGEELTPKMVRLRELGGSGVGTGRAV---LNPNDTLEKRSYNWCSHLYLQ 1164
Query: 377 LRTEVQTLGK-SERVML 424
+ T+ +GK E +M+
Sbjct: 1165 IITDEAMIGKPGEPIMV 1181
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +2
Query: 206 IENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAYNDISRSYESLRT 385
+ R+N+ENS + T LR DRL TN R+L N E N++SR +++
Sbjct: 1346 LSTFRRNNENSDERRMTDLRVELDRLRTTN----RTLRNAN---EEMKNELSRLKQTVER 1398
Query: 386 EVQTLGKSERVMLETADXVLATKK 457
E + D ++A+ K
Sbjct: 1399 RDTKNEPDEWERRKRQDEIIASLK 1422
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLT 319
A Q + I+ + I+Q ++ +KIT K +E+ TN+DI + +T
Sbjct: 338 AIKQESKDISLNFDTIKQIEKEEFNKITGKYKEIDVSNNVTNDDIIKEIT 387
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 125 ESMWKDLPRLT--DLHSAANQTLQAITTGIENIRQNDENSGSK 247
E + KD P+ T + NQ+L A T + NDE +GSK
Sbjct: 98 EKVEKDPPKTTVRKKKNQVNQSLSAENTNAKTSSDNDERAGSK 140
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 502 FTNFHQNLMDPVFDALFGCQYVICSFQHNTFTLT*CLNLGTK*FIATR 359
+TNF NL+ P+ C Q+NT CL K F+ TR
Sbjct: 185 YTNFIYNLLSPIETDFLNCVSEFEGIQNNTLF---CLFYSAKIFVRTR 229
>U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform a
protein.
Length = 668
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 155 TDLHSAANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNED 301
T L + A + I T I+ + + GS I KLR++ DR+VA N D
Sbjct: 111 TGLGNDAEYVNKIIETAIDTYKTLSKQ-GSGIPQKLRDLIDRIVARNLD 158
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 155 TDLHSAANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNED 301
T L + A + I T I+ + + GS I KLR++ DR+VA N D
Sbjct: 111 TGLGNDAEYVNKIIETAIDTYKTLSKQ-GSGIPQKLRDLIDRIVARNLD 158
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 329 CFLVSDCAECLRWSLPDDHPSLVTSLL 249
C LVSDC E L SLP + P V S+L
Sbjct: 149 CNLVSDCDEQLIISLPFNQPVKVHSIL 175
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 329 CFLVSDCAECLRWSLPDDHPSLVTSLL 249
C LVSDC E L SLP + P V S+L
Sbjct: 149 CNLVSDCDEQLIISLPFNQPVKVHSIL 175
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 329 CFLVSDCAECLRWSLPDDHPSLVTSLL 249
C LVSDC E L SLP + P V S+L
Sbjct: 149 CNLVSDCDEQLIISLPFNQPVKVHSIL 175
>AC006757-1|AAF60544.1| 163|Caenorhabditis elegans Hypothetical
protein Y40C7B.4 protein.
Length = 163
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 161 LHSAANQTLQAITTGIE-NIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLT 337
LH A + L I +E N RQN+ + K+ +K + ++L +EDI+ + + N
Sbjct: 12 LHVADPENL-TIRQQVEVNKRQNEADRIKKMISKRDALIEKLRVLDEDIKNEVARMNARR 70
Query: 338 ERAYNDISRSYESLRTEVQTLGKSERVMLE 427
E N+I+ +R E L +R ++E
Sbjct: 71 EAYDNEIA---IKMRREGANLNIRKRKLIE 97
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 358 DVVVSALRQCVSLCQTALNVFVGRYQTI 275
++VVSAL +SL QTA N+ QT+
Sbjct: 812 ELVVSALDSAMSLIQTARNLLTAVVQTV 839
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 358 DVVVSALRQCVSLCQTALNVFVGRYQTI 275
++VVSAL +SL QTA N+ QT+
Sbjct: 812 ELVVSALDSAMSLIQTARNLLTAVVQTV 839
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 RLVATNEDIQRSLTQGNTLTERAYNDISRSYESLRTEVQTLGKSERVMLETADXVLATKK 457
R ATNE I++ L N ND++ ++ + ++G+ V+ + +L +K
Sbjct: 41 RTTATNERIKKKLVIKNFKANANQNDVAMGDTNIDSTDGSVGRDWAVLSDNVFAILEDRK 100
Query: 458 RV 463
V
Sbjct: 101 TV 102
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 278 RLVATNEDIQRSLTQGNTLTERAYNDISRSYESLRTEVQTLGKSERVMLETADXVLATKK 457
R ATNE I++ L N ND++ ++ + ++G+ V+ + +L +K
Sbjct: 78 RTTATNERIKKKLVIKNFKANANQNDVAMGDTNIDSTDGSVGRDWAVLSDNVFAILEDRK 137
Query: 458 RV 463
V
Sbjct: 138 TV 139
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/116 (17%), Positives = 52/116 (44%)
Frame = +2
Query: 170 AANQTLQAITTGIENIRQNDENSGSKITTKLREMGDRLVATNEDIQRSLTQGNTLTERAY 349
A + +QA+ +N + + K+ ++ E +R+ D Q+ +TQ ++A
Sbjct: 3 AIKKKMQAMKIEKDNALDRADAAEEKVR-QITEKLERVEEELRDTQKKMTQTGDDLDKAQ 61
Query: 350 NDISRSYESLRTEVQTLGKSERVMLETADXVLATKKRVEYGVHQILMEVSELIQNT 517
D+S + L + +T+ ++E + + ++ +E ++ + +L + T
Sbjct: 62 EDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEAT 117
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 358 DVVVSALRQCVSLCQTALNVFVGRYQTI 275
++VVSAL +SL QTA N+ QT+
Sbjct: 812 ELVVSALDSAMSLIQTARNLLTAVVQTV 839
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,830,084
Number of Sequences: 27780
Number of extensions: 235619
Number of successful extensions: 737
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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